DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hpd and Hpdl

DIOPT Version :10

Sequence 1:NP_730536.1 Gene:Hpd / 40263 FlyBaseID:FBgn0036992 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_666368.1 Gene:Hpdl / 242642 MGIID:2444646 Length:371 Species:Mus musculus


Alignment Length:380 Identity:102/380 - (26%)
Similarity:176/380 - (46%) Gaps:46/380 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 HLTFYVGNAKQAASYYTTRLGFEPLGYQGLETGERRFAKHAVRQNKIVFVFVSAYTPDDEEHGLH 85
            |:.|:|...:..|.......||:||..:  |.|..|  :.|:|....||:......|.:..:.|.
Mouse    10 HIAFHVPAGQPLARDLHRVFGFQPLAVR--EAGGWR--QLALRSGDAVFLVNEGTGPQEPLYSLD 70

  Fly    86 LMRHGDGVKDVAFEVEDLNAIFTLAVSRGAEVVRDIWEESDDQGFVRFATIKT-YGDTTHTFVER 149
            .........::.|:|||::.......:||..:........|.||...:..:.: .|:.:.|.::|
Mouse    71 PHHSVPSATNLCFDVEDVDGAARALAARGCIMPVPPTRVRDAQGTATYTVLSSPAGNLSLTLLQR 135

  Fly   150 NGYAGDFLPGFQRSPKDVLLNGLPSTK----LNFIDHVV-----GNQPDLQMESVASWYERILQF 205
            .||.|.|||||:         .||.|.    ::.:||:.     |:.|.|.     .|:...|.|
Mouse   136 AGYRGSFLPGFR---------PLPCTPGPGWVSHVDHLTLACTSGSSPMLM-----RWFHDCLGF 186

  Fly   206 HR--FWSVDDSQIHTEYSA------LRSIVMA----NYEETVKMPINEPANGKKKSQIQEYVEYY 258
            |.  ....:|.::..:.:|      ||...:.    |...|:.:..:.|....|:.|:::::..:
Mouse   187 HHLPLSPGEDPEMGLKVAAGSGRGGLRLTALQTPPNNTVPTLVLAESLPGLNSKQDQVEQFLTRH 251

  Fly   259 GGGGVQHIALNTDDIIEAVSNLKARGTEFLTIPSSYYEI--LQEQLSHSRTKIKEDMEVLKKLNI 321
            ||.|:||:.|.|.:||:|...:...|...||.|.:||:.  .:||:..:..|    ..:|::..|
Mouse   252 GGPGLQHVGLYTPNIIDASEGMAKAGCRLLTPPEAYYQQPGKEEQILAAGHK----PGLLERQGI 312

  Fly   322 LIDFDENGYLLQIFTKNCQDRPTLFLEVIQRYNHNGFGAGNFKSLFTAIEIEQAK 376
            |:|.|::.:|||:|||:.....|.|||:|||....|||..|.::|:.:::.|.|:
Mouse   313 LLDGDKDEFLLQVFTKSLFAEDTFFLELIQRQGATGFGQNNIRALWQSVQEEAAR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HpdNP_730536.1 4HPPD 17..380 CDD:273528 102/380 (27%)
HpdlNP_666368.1 HPPD_N_like 9..148 CDD:319930 37/150 (25%)
HPPD_C_like 158..363 CDD:319913 60/213 (28%)

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