DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hpd and C31H2.4

DIOPT Version :9

Sequence 1:NP_730536.1 Gene:Hpd / 40263 FlyBaseID:FBgn0036992 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_508875.1 Gene:C31H2.4 / 183101 WormBaseID:WBGene00016294 Length:364 Species:Caenorhabditis elegans


Alignment Length:381 Identity:163/381 - (42%)
Similarity:232/381 - (60%) Gaps:33/381 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GKFLSFDHLTFYVGNAKQAASYYTTRLGFEPLGYQGLETGERRFAKH--------AVRQNKIVFV 70
            |...:..|:.|.|.||.|:|.:|.:..|||            :||:.        |:| |....|
 Worm     2 GSISAIHHIEFIVSNALQSAYWYCSGFGFE------------KFAEKITDESTSIALR-NGTARV 53

  Fly    71 FVSAYTPD----DEEHGLHLMRHGDGVKDVAFEVEDLNAIFTLAVSRGAEVVRDIWEESDDQGFV 131
            .:::|...    |:     |::|||.:|||:|.|::|:|:....|....:|::.. |.|...|.|
 Worm    54 IITSYNSQNIYTDQ-----LIKHGDFIKDVSFRVDNLDAVLQNLVENDIKVIQQS-EVSTKDGLV 112

  Fly   132 RFATIKTY-GDTTHTFVERNGYAGDFLPGFQRSPKDVLLNGLPSTKLNFIDHVVGNQPDLQMESV 195
            |.||:.:. ||.|||..|...:.|:|||.|.......|...:.......:||||.|.|..:||:.
 Worm   113 RTATLLSEGGDVTHTLFELGEFKGNFLPFFTPISNFELFENIEKMPAILMDHVVQNYPIGEMEAA 177

  Fly   196 ASWYERILQFHRFWSVDDSQIHTEYSALRSIVMANYEETVKMPINEPANGKK-KSQIQEYVEYYG 259
            |.||.:.::..|||||||....:|:||:.:.::.|.:.||::.:.|...|:| ||||:|::.|:|
 Worm   178 ADWYFKTMRLKRFWSVDDKVATSEFSAMTAWLLVNDDHTVQVTLAEGVKGRKGKSQIEEFINYHG 242

  Fly   260 GGGVQHIALNTDDIIEAVSNLKARGTEFLTIPSSYYEILQEQLSHSRTKIKEDMEVLKKLNILID 324
            |.||||.||..:|||.||..:|:|..|||||||.||:.|:|:||.:...:|||::::::||||:|
 Worm   243 GSGVQHFALLVEDIISAVQIMKSRSVEFLTIPSQYYDNLEERLSKTNLIVKEDLKMIRELNILMD 307

  Fly   325 FDENGYLLQIFTKNCQDRPTLFLEVIQRYNHNGFGAGNFKSLFTAIEIEQAKRGNL 380
            |||||||||||:|..|||||||:|:|||.|..||||||||:||.|:|.||.|||.|
 Worm   308 FDENGYLLQIFSKPLQDRPTLFIEIIQRANFKGFGAGNFKALFDAVEREQEKRGTL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HpdNP_730536.1 4HPPD 17..380 CDD:273528 161/376 (43%)
C31H2.4NP_508875.1 4HPPD 5..363 CDD:273528 161/376 (43%)
HPPD_N_like 7..144 CDD:176690 50/155 (32%)
HPPD_C_like 162..355 CDD:176673 104/192 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3185
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2226
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1087836at2759
OrthoFinder 1 1.000 - - FOG0004104
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11959
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2845
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.830

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