DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL15 and RPL27AB

DIOPT Version :10

Sequence 1:NP_524185.1 Gene:mRpL15 / 40261 FlyBaseID:FBgn0036990 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_173743.1 Gene:RPL27AB / 838938 AraportID:AT1G23290 Length:146 Species:Arabidopsis thaliana


Alignment Length:167 Identity:36/167 - (21%)
Similarity:56/167 - (33%) Gaps:50/167 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KQNDKRGRAQHGGDKHGAGNKGSGQRQNFMRLGYETGNQPFYLRFPYEPYYKG----------HH 87
            |...|||....|..:.|...|..|.|.|       .|....: |..::.|:.|          |.
plant     7 KNRKKRGHVSAGHGRIGKHRKHPGGRGN-------AGGMHHH-RILFDKYHPGYFGKVGMRYFHK 63

  Fly    88 LKRQY--PPISLLQLQVLI-----------DTNRIDISQPIDISTLCNSGLLKLKPAEMEYGFQL 139
            |:.::  |.::|.:|..|:           :...||::|......|....|.:.||         
plant    64 LRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKP--------- 119

  Fly   140 TDDGLDNFQAKINIEVQHASEAVIAAIEKNGGVIRTA 176
                   |..|..: :...:|..|.  |..|.|:.||
plant   120 -------FVVKAKL-ISKTAEKKIK--EAGGAVVLTA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL15NP_524185.1 Ribosomal_L27A 45..173 CDD:459951 28/150 (19%)
RPL27ABNP_173743.1 PTZ00160 1..146 CDD:185489 34/165 (21%)

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