DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psn and PS2

DIOPT Version :9

Sequence 1:NP_001262111.1 Gene:Psn / 40260 FlyBaseID:FBgn0284421 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_180551.1 Gene:PS2 / 817540 AraportID:AT2G29900 Length:397 Species:Arabidopsis thaliana


Alignment Length:444 Identity:142/444 - (31%)
Similarity:227/444 - (51%) Gaps:70/444 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 QHVIKLFVPVSLCMLVV---VATINSISFYNSTDVYLLYTPFHEQSPEPSV--KFWSALANSLIL 161
            :.:|.:..|||:||..|   |..:||....:|.....:.|..:.:|...|.  ||..||.||::.
plant    16 EELIAILTPVSICMFTVVLLVCILNSDPSSSSASFSSIATAAYSESDSDSSWDKFVGALLNSVVF 80

  Fly   162 MSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFTYLYLEELLRAYNIPMDYPTALLIMWN 226
            ::.:.|.||:|::|:..||.:.:..::..|:|::|.......|..|:..:..|:|..|.|::::|
plant    81 VAAITVATFVLVLLFYLRCVKFLKFYMGFSAFIVLGNLGGEILVLLIDRFRFPIDSITFLILLFN 145

  Fly   227 FGVVGMMSIHW-QGPLRLQQGYLIFVAALMALVFIKYLPEWTAWAVLAAISIWDLIAVLSPRGPL 290
            |.|||:.::.. :..:.:.||||:::..|:| .|...|||||.|.:|.|::::|:.|||.|.|||
plant   146 FSVVGVFAVFMSKFSILITQGYLVWIGVLVA-YFFTLLPEWTTWVLLVALALYDIAAVLLPVGPL 209

  Fly   291 RILVETAQERNEQIFPALIYSSTVVYALVNTVTPQQSQATASSSPSSSNSTTTTRATQNSLASPE 355
            |:|||.|..|:|.| |||:|.:..|  :.|.....|.:.......|.:|      |.:|.:...|
plant   210 RLLVEMAISRDEDI-PALVYEARPV--IRNDSRSVQRRVWREQRSSQNN------ANRNEVRVVE 265

  Fly   356 AAAASGQRTGNSHPRQNQRDDGSVLATEGMPLVTFKSNLRGNAEAAGFTQEWSANLSERVARRQI 420
            :|....:..|:|     :|.:.||      ||:..:.....|:|..                  :
plant   266 SAEVEEEHVGSS-----ERAEISV------PLIDRRPEQAENSETF------------------L 301

  Fly   421 EVQSTQSGNAQRSNEYRTVTAPDQNHPDGQEERGIKLGLGDFIFYSVLVGKASSYGDWTTTIACF 485
            |.....|..|                        ||||||||||||||||:|:.| |..|..||:
plant   302 EGIGLGSSGA------------------------IKLGLGDFIFYSVLVGRAAMY-DLMTVYACY 341

  Fly   486 VAILIGLCLTLLLLAIWRKALPALPISITFGLIFCFATSAVVKPFMEDLSAKQV 539
            :||:.||.:||:||::::|||||||:||..|::|.|....:::.|:...|:..|
plant   342 LAIIAGLGITLMLLSVYQKALPALPVSIMLGVVFYFLARLLLEVFVVQCSSNLV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsnNP_001262111.1 Presenilin 98..531 CDD:279427 139/434 (32%)
PS2NP_180551.1 Presenilin 15..387 CDD:395857 139/434 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 203 1.000 Domainoid score I843
eggNOG 1 0.900 - - E1_KOG2736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I1299
OMA 1 1.010 - - QHG54370
OrthoDB 1 1.010 - - D797738at2759
OrthoFinder 1 1.000 - - FOG0002393
OrthoInspector 1 1.000 - - otm2476
orthoMCL 1 0.900 - - OOG6_101989
Panther 1 1.100 - - LDO PTHR10202
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1815
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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