DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psn and psen2

DIOPT Version :9

Sequence 1:NP_001262111.1 Gene:Psn / 40260 FlyBaseID:FBgn0284421 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_571589.2 Gene:psen2 / 58026 ZFINID:ZDB-GENE-000330-9 Length:441 Species:Danio rerio


Alignment Length:536 Identity:251/536 - (46%)
Similarity:326/536 - (60%) Gaps:109/536 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ASEDDANVGSQIGAAERLERPPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPCGSRPSRLTGG 79
            :.||..|           ||....|.:.....|.|||.    .:::|.....:..|:..|| :..
Zfish     6 SEEDSYN-----------ERSALVQSESPTVPSYNQDN----AMSLPQDTDSKRSGAVRSR-SAS 54

  Fly    80 GGGSGGPPTNEM-------EEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFY-NSTDVYLL 136
            |.|..||...|.       |||..|||||:|||.||:||:|||:||||||.|:||| ..:...|:
Zfish    55 GSGDAGPVDRERADTPDGEEEELTLKYGAKHVIMLFIPVTLCMVVVVATIKSVSFYTEKSGQRLI 119

  Fly   137 YTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFTY 201
            ||||.|.......:..:::.|:|:::||:|.||.:|::|||.|||:.|||||||||.||||.|::
Zfish   120 YTPFEEDPNSVGQRLLNSVLNTLVMISVIVFMTIILVLLYKYRCYKFIHGWLILSSLMLLFWFSF 184

  Fly   202 LYLEELLRAYNIPMDYPTALLIMWNFGVVGMMSIHWQGPLRLQQGYLIFVAALMALVFIKYLPEW 266
            :||.|:.:.||:.|||||.::|:||||||||:.|||:|||||||.|||.::|||||:||||||||
Zfish   185 MYLGEVFKTYNVAMDYPTLVMIIWNFGVVGMICIHWKGPLRLQQAYLIVISALMALIFIKYLPEW 249

  Fly   267 TAWAVLAAISIWDLIAVLSPRGPLRILVETAQERNEQIFPALIYSSTVVYALVNTVTPQQSQATA 331
            :||.:|.||||:||||||.|:||||:||||||||||.|||||||||.:|:.:             
Zfish   250 SAWVILGAISIYDLIAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVWMV------------- 301

  Fly   332 SSSPSSSNSTTTTRATQNSLASPEAAAASGQRTGNSHPRQNQRDDGSVLATEGMPLVTFKSNLRG 396
              ..:.||             :|::|   |:|         :|..|.|...||:           
Zfish   302 --GMADSN-------------NPDSA---GER---------RRSGGGVRTQEGV----------- 328

  Fly   397 NAEAAGFTQEWSANLSERVARRQIEVQSTQSGNAQRSNEYRTVTAPDQNHPDGQEERGIKLGLGD 461
                                  :.|..:.|:|..|.|.|           .|.:|:||:||||||
Zfish   329 ----------------------ESEDDAPQAGRRQYSAE-----------EDLEEDRGVKLGLGD 360

  Fly   462 FIFYSVLVGKASSY-GDWTTTIACFVAILIGLCLTLLLLAIWRKALPALPISITFGLIFCFATSA 525
            |||||||||||::. |||.||:|||||||||||||||||||::||||||||||||||:|.|:|..
Zfish   361 FIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFSTDN 425

  Fly   526 VVKPFMEDLSAKQVFI 541
            :|:|||:.|:|.|.:|
Zfish   426 LVRPFMDSLAAHQYYI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsnNP_001262111.1 Presenilin 98..531 CDD:279427 222/434 (51%)
psen2NP_571589.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74 19/83 (23%)
Presenilin 80..431 CDD:279427 222/434 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..346 15/93 (16%)
PAL 407..409 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588190
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2736
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H386
Inparanoid 1 1.050 431 1.000 Inparanoid score I1692
OMA 1 1.010 - - QHG54370
OrthoDB 1 1.010 - - D357270at33208
OrthoFinder 1 1.000 - - FOG0002393
OrthoInspector 1 1.000 - - otm24389
orthoMCL 1 0.900 - - OOG6_101989
Panther 1 1.100 - - LDO PTHR10202
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2736
SonicParanoid 1 1.000 - - X1815
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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