DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psn and Psen1

DIOPT Version :10

Sequence 1:NP_524184.1 Gene:Psn / 40260 FlyBaseID:FBgn0284421 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001349200.1 Gene:Psen1 / 19164 MGIID:1202717 Length:467 Species:Mus musculus


Alignment Length:543 Identity:255/543 - (46%)
Similarity:335/543 - (61%) Gaps:92/543 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAVNLQASCSSGLASEDDANVGSQIGAAERLERPPRRQQQRNNYGSSNQDQPDAAILAVPNVVMR 66
            |.::..:..||.:.|::|:....|....:||:.|   :...|....||..|          ||.:
Mouse    14 AQMSEDSHSSSAIRSQNDSQERQQQHDRQRLDNP---EPISNGRPQSNSRQ----------VVEQ 65

  Fly    67 EPCGSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVATINSISFYNST 131
            :                     .|.:||..|||||:|||.|||||:|||:||||||.|:|||...
Mouse    66 D---------------------EEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRK 109

  Fly   132 DVYLLYTPFHEQSPEPSVKFWSALANSLILMSVVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLL 196
            |..|:||||.|.:.....:...::.|:.|::||:|:||.||:||||.|||::||.|||:||.:||
Mouse   110 DGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVIMTILLVVLYKYRCYKVIHAWLIISSLLLL 174

  Fly   197 FIFTYLYLEELLRAYNIPMDYPTALLIMWNFGVVGMMSIHWQGPLRLQQGYLIFVAALMALVFIK 261
            |.|:::||.|:.:.||:.:||.|..|::||||||||::|||:|||||||.|||.::|||||||||
Mouse   175 FFFSFIYLGEVFKTYNVAVDYVTVALLIWNFGVVGMIAIHWKGPLRLQQAYLIMISALMALVFIK 239

  Fly   262 YLPEWTAWAVLAAISIWDLIAVLSPRGPLRILVETAQERNEQIFPALIYSSTVVYALVNTVT-PQ 325
            ||||||||.:||.||::||:|||.|:||||:||||||||||.:|||||||||:|: |||... ..
Mouse   240 YLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSSTMVW-LVNMAEGDP 303

  Fly   326 QSQATASSSPSSSNSTTTTRATQNSLASPEAAAASGQRTGNSHPRQNQRDDGSVLATEGMPLVTF 390
            ::|.....:| ..|:....|.||:|            .:||        |||             
Mouse   304 EAQRRVPKNP-KYNTQRAERETQDS------------GSGN--------DDG------------- 334

  Fly   391 KSNLRGNAEAAGFTQEWSANLSERVARRQIEVQSTQSGNAQRSNEYRTVTAPDQNHPDGQEERGI 455
                       ||::||.|.....:...:   .:.:|..|.:......:|:.|      .||||:
Mouse   335 -----------GFSEEWEAQRDSHLGPHR---STPESRAAVQELSGSILTSED------PEERGV 379

  Fly   456 KLGLGDFIFYSVLVGKAS--SYGDWTTTIACFVAILIGLCLTLLLLAIWRKALPALPISITFGLI 518
            ||||||||||||||||||  :.|||.||||||||||||||||||||||::||||||||||||||:
Mouse   380 KLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLV 444

  Fly   519 FCFATSAVVKPFMEDLSAKQVFI 541
            |.|||..:|:|||:.|:..|.:|
Mouse   445 FYFATDYLVQPFMDQLAFHQFYI 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsnNP_524184.1 Presenilin 98..531 CDD:460052 231/435 (53%)
Psen1NP_001349200.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 15/87 (17%)
Presenilin 76..457 CDD:460052 231/435 (53%)
Important for cleavage of target proteins. /evidence=ECO:0000250|UniProtKB:P49768 288..290 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..357 17/100 (17%)
Required for interaction with CTNNB1. /evidence=ECO:0000250|UniProtKB:P49768 322..450 82/180 (46%)
Required for interaction with CTNND2. /evidence=ECO:0000250|UniProtKB:P49768 372..399 23/32 (72%)
Important for cleavage of target proteins. /evidence=ECO:0000250|UniProtKB:P49768 377..381 2/3 (67%)
Important for cleavage of target proteins. /evidence=ECO:0000250|UniProtKB:P49768 432..434 1/1 (100%)
PAL 433..435 1/1 (100%)
Interaction with MTCH1. /evidence=ECO:0000250|UniProtKB:P49768 464..467 1/2 (50%)

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