DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psn and hop-1

DIOPT Version :9

Sequence 1:NP_001262111.1 Gene:Psn / 40260 FlyBaseID:FBgn0284421 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_491328.1 Gene:hop-1 / 172017 WormBaseID:WBGene00001985 Length:358 Species:Caenorhabditis elegans


Alignment Length:444 Identity:118/444 - (26%)
Similarity:201/444 - (45%) Gaps:95/444 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 YGAQHVIKLFVPVSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKFWSALANSLILMS 163
            |..:.:..:..||::|||.|...:............::|..||......|...      :|.|:.
 Worm     8 YSGKTITGVLYPVAICMLFVAINVKLSQPEQQEQSKVVYGLFHSYDTADSGTI------TLYLIG 66

  Fly   164 VVVVMTFLLIVLYKKRCYRIIHGWLILSSFMLLFIFTYLYLEELLRAYNIPMDYPTALLIMWNFG 228
            .:::.|.|.:..|:.:.|:.|..:::.:|..:|.:::..:.:.:..|.:||:..||...::..||
 Worm    67 FLILTTSLGVFCYQMKFYKAIKVYVLANSIGILLVYSVFHFQRIAEAQSIPVSVPTFFFLILQFG 131

  Fly   229 VVGMMSIHWQGPLRLQQGYLIFVAALMALVFIKYLPEWTAWAVLAAISIWDLIAVLSPRGPLRIL 293
            .:|:..:||:...||.|.|||.:|.|.|:..:..||:||.|..|.|||.||::|||:|.|||::|
 Worm   132 GLGITCLHWKSHRRLHQFYLIMLAGLTAIFILNILPDWTVWMALTAISFWDIVAVLTPCGPLKML 196

  Fly   294 VETAQERNEQIFPALIYSSTVVYALVNTV-TPQQSQATASSSPSSSNSTTTTRATQNSLASPEAA 357
            ||||..|.:..|||::|:|:   :.||.| :|..:::.::.....:||:::.....:||..|...
 Worm   197 VETANRRGDDKFPAILYNSS---SYVNEVDSPDTTRSNSTPLTEFNNSSSSRLLESDSLLRPPVI 258

  Fly   358 AASGQRTGNSHPRQNQRDDGSVLATEGMPLVTFKSNLRGNAEAAGFTQEWSANLSERVARRQIEV 422
                       |||                                            .|...||
 Worm   259 -----------PRQ--------------------------------------------IREVREV 268

  Fly   423 QSTQSGNAQRSNEYRTVTAPDQNHPDGQEERGIKLGLGDFIFYSVLVGKASSYGDWTTTIACFVA 487
            :.|                             |:||:|||:|||:::|.........|.:||||:
 Worm   269 EGT-----------------------------IRLGMGDFVFYSLMLGNTVQTCPLPTVVACFVS 304

  Fly   488 ILIGLCLTLLLLAIWRKALPALPISITFGLIFCFATSAVVKPFMEDLSAKQVFI 541
            .|:||.:||.::.:.:.||||||..:....||.|::...:.|| .||...|:.:
 Worm   305 NLVGLTITLPIVTLSQTALPALPFPLAIAAIFYFSSHIALTPF-TDLCTSQLIL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PsnNP_001262111.1 Presenilin 98..531 CDD:279427 114/432 (26%)
hop-1NP_491328.1 Peptidase_A22B 8..348 CDD:294809 115/433 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3257
OMA 1 1.010 - - QHG54370
OrthoDB 1 1.010 - - D357270at33208
OrthoFinder 1 1.000 - - FOG0002393
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101989
Panther 1 1.100 - - O PTHR10202
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.740

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