DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LPP and Zyx

DIOPT Version :10

Sequence 1:XP_047304053.1 Gene:LPP / 4026 HGNCID:6679 Length:676 Species:Homo sapiens
Sequence 2:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster


Alignment Length:657 Identity:210/657 - (31%)
Similarity:296/657 - (45%) Gaps:118/657 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    58 QLSEIPTMSHPSWLPPKSTGEPL-----GHVPARMETTHSFGNPSISVSTQQPPKKFAPVVAPKP 117
            ||.|:.       ||...||.||     |.|...:....:..|.|:......|||       |..
  Fly     7 QLRELS-------LPKGDTGSPLVCIGHGKVAKLVAKISNNQNASVKRRLDIPPK-------PPI 57

Human   118 KYNPYKQPGGEGDFLPPPPP----PLDDSSALPSISGNFPPPPPLDEEAFKVQGNPGGKTLEERR 178
            |||...|.......|....|    ||  .....::.|:.|....|..|..........||..:..
  Fly    58 KYNEMPQVPSSRQVLCSREPLYSQPL--IGVEKTMRGHMPFRKYLSSEFGVADTQINRKTTLDNP 120

Human   179 SSLDAEIDSLTSILADLE----CSSPYKPRPPQSSTGSTASPPVSTPVTGHKRMVIPNQPPLTAT 239
            :.|:.::::|......:|    .....||..|.:|.....|..:|      |.::..|   |.:.
  Fly   121 AILEQQLEALAYHKLQMEKKGLLGVQAKPTQPLNSFTKPLSKTLS------KSLIYSN---LGSV 176

Human   240 KKSTLKPQPAPQAGPIPVAPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSPHYMAAPSS 304
            :|.                 |.||:........|.:|.|..:....:    |:..|...|.:..:
  Fly   177 RKE-----------------IETLELLTDETKISASTYSNVNETAMD----SSHSSTQKMLSVCT 220

Human   305 GQIYGSGPQGYNTQPVPVSGQCPPPSTRGGM--DYAYIPPPGLQPEPGYGYAPNQG-----RYYE 362
            ..|..:     ....:|     ||||....:  .|:.:....|:......|..|..     :.|.
  Fly   221 NFISDN-----EKDELP-----PPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYA 275

Human   363 GYYAAGPGYGGRNDS--DPTYGQQGHPNTWKREPGYTPPGAGNQNPPGMYPVTGPKKTYITDPVS 425
            ..||......|::.|  |..|           ||....|...:..|...|.:   ..:|:.|.  
  Fly   276 NQYAMQHDATGKSSSTYDSIY-----------EPINPRPCVADTLPRESYNL---HNSYVNDN-- 324

Human   426 APCAPPLQPKGGHSGQLGPS-----------SVAPSFRPEDELEHLTKKMLYDMENPPAD----- 474
                   .|...|...:..|           :...:|...:.:....|:.|.:..:.|.:     
  Fly   325 -------NPNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGLKNYISIPTEPVQEL 382

Human   475 EYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQ 539
            |.:|||.:|...|:||.:|||||||::|:.||||..|...|:|:||||::.|.|||..|:.|||:
  Fly   383 ENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEK 447

Human   540 CNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCK 604
            |:||.:||:|||||||||.|||.|||||:|.:||||:.|||||....:||.||||||||||.|||
  Fly   448 CSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCK 512

Human   605 EPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLL-SEGDNQGCYPLDGHILCKTCNSARIRVL 668
            :||||.||||||:|:|||||.||:.||:|||||.|| ||.:.:||||||.|:|||:||:.|::.|
  Fly   513 QPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKSCNAKRVQAL 577

Human   669 TAKASTD 675
            |.:.:::
  Fly   578 TNRMTSE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPPXP_047304053.1 PHA03247 <83..452 CDD:223021 70/396 (18%)
LIM1_TRIP6 480..533 CDD:188736 28/52 (54%)
LIM2_TRIP6 540..592 CDD:188742 34/51 (67%)
LIM3_TRIP6 600..665 CDD:188820 45/65 (69%)
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 28/52 (54%)
LIM2_LPP 448..507 CDD:188740 41/58 (71%)
LIM3_LPP 508..575 CDD:188821 46/66 (70%)

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