DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and AGP2

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_009690.1 Gene:AGP2 / 852429 SGDID:S000000336 Length:596 Species:Saccharomyces cerevisiae


Alignment Length:608 Identity:102/608 - (16%)
Similarity:190/608 - (31%) Gaps:188/608 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGP-GIILSF------ILAGFISMLAALC 90
            |...|.|....:.|:.|..::|..::|..|. |....|| .::|:|      ||...:|....:|
Yeast    82 TETRRKLENRHVQLIAISGVIGTALFVAIGK-ALYRGGPASLLLAFALWCVPILCITVSTAEMVC 145

  Fly    91 YAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYVDSMLGGWIGNTT 155
            :....:...:..:..|...:::...|.|   |  .||.:.....:...              ||.
Yeast   146 FFPVSSPFLRLATKCVDDSLAVMASWNF---W--FLECVQIPFEIVSV--------------NTI 191

  Fly   156 LELTGGIHEPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLVISVG----- 215
            :......:..|:.....|:.:|:..:.|....|.::.......::..:.:.....:..:|     
Yeast   192 IHYWRDDYSAGIPLAVQVVLYLLISICAVKYYGEMEFWLASFKIILALGLFTFTFITMLGGNPEH 256

  Fly   216 --------------FWYADGKNWSEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNP 266
                          .::.||.:..::.|.|     .|.:|......:...|.:.|:....|.|.|
Yeast   257 DRYGFRNYGESPFKKYFPDGNDVGKSSGYF-----QGFLACLIQASFTIAGGEYISMLAGEVKRP 316

  Fly   267 SVSIPVA------TVISLFV---VTVGYILVSAALTLMIPISEINP-AASLPE--AFGQLNLSWA 319
            ...:|.|      .:..||:   :.||.:.......|...|:|..| |.|.|.  |...|.:...
Yeast   317 RKVLPKAFKQVFVRLTFLFLGSCLCVGIVCSPNDPDLTAAINEARPGAGSSPYVIAMNNLKIRIL 381

  Fly   320 KYLISIGALCGMTTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLA 384
            ..:::|..:....:......:...|..|.||.||.....|.:.| ...||:.::.:|        
Yeast   382 PDIVNIALITAAFSAGNAYTYCSSRTFYGMALDGYAPKIFTRCN-RHGVPIYSVAIS-------- 437

  Fly   385 LVFDLAKLVEFMSIGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQS 449
            ||:.|..|::           :.|.|.::|.:                                 
Yeast   438 LVWALVSLLQ-----------LNSNSAVVLNW--------------------------------- 458

  Fly   450 SMDTSSPTSEMIEEVLAGRLKAQFRCLEPLLGRFEPGSVVSVAVMLFIFLSFAICVELKV----- 509
                      :|..:.|.:|                   ::..|:..::|.|.....::.     
Yeast   459 ----------LINLITASQL-------------------INFVVLCIVYLFFRRAYHVQQDSLPK 494

  Fly   510 ----SWTQLYTGTWWALIIYGFIIFAAGTCVAVIAVHNQ--------NTRGLIFKVPLVPFVPAL 562
                ||.|.||.      |.|.:     :|.|:|.:...        ||:..:|..        |
Yeast   495 LPFRSWGQPYTA------IIGLV-----SCSAMILIQGYTVFFPKLWNTQDFLFSY--------L 540

  Fly   563 GIFCNILLMVHLDAVTWVRFFVW 585
            .:|.||.:.|...       |:|
Yeast   541 MVFINIGIYVGYK-------FIW 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 102/608 (17%)
AA_permease_C 551..601 CDD:290617 8/35 (23%)
AGP2NP_009690.1 LysP 41..596 CDD:223903 102/608 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I2106
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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