DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13248 and GNP1

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_010796.1 Gene:GNP1 / 852121 SGDID:S000002916 Length:663 Species:Saccharomyces cerevisiae


Alignment Length:580 Identity:115/580 - (19%)
Similarity:213/580 - (36%) Gaps:142/580 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SGICTKMNRTKSVPT--DVMETP---------LNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKE 67
            |.:..::||..|..|  .:.::|         |.:.:......::.:|..:|.|:.|....|...
Yeast   113 SQLDNELNRKSSYITVDGIKQSPQEQEQKQENLKKSIKPRHTVMMSLGTGIGTGLLVGNSKVLNN 177

  Fly    68 MAGP-GIILSFILAG---FISMLA----ALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNI 124
             ||| |:|:.:.:.|   :..:.|    |:.|::.      .|....|....:.....|.:.|..
Yeast   178 -AGPGGLIIGYAIMGSCVYCIIQACGELAVIYSDL------IGGFNTYPLFLVDPALGFSVAWLF 235

  Fly   125 LLE-------HMLGAASVARAWSGYVDSMLGGWIGNTTLELTGGIHEPGLAQYPDVLA----FLV 178
            .|:       .::.|:...:.|:..|:                          |||..    .|:
Yeast   236 CLQWLCVCPLELVTASMTIKYWTTSVN--------------------------PDVFVVIFYVLI 274

  Fly   179 CIVYAAALAGGVKATAVFN--SLLTLVNIAVMVLVISVGFWYADG----KNWSE--AEGGFLP-Y 234
            .::......|..:|...||  .:|.:|...::.::|..|....||    |.|.:  |..|..| .
Yeast   275 VVINVFGAKGYAEADFFFNCCKILMIVGFFILAIIIDCGGAGTDGYIGSKYWRDPGAFRGDTPIQ 339

  Fly   235 GVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATVISLFVVTVGYILVSAALTL---MI 296
            ...||:|...|..:||...:.:|.:..|..||..:||.|....::.:...::   |:|||   ::
Yeast   340 RFKGVVATFVTAAFAFGMSEQLAMTASEQSNPRKAIPSAAKKMIYRILFVFL---ASLTLVGFLV 401

  Fly   297 PISE---INPAASLPEAFGQLNLSWAKYLISIGA--------------LCGMTTTLLGSLFALPR 344
            |.:.   :..|.|..:|        :.|:|::.:              |..:.:...|:.:...|
Yeast   402 PYTSDQLLGAAGSATKA--------SPYVIAVSSHGVRVVPHFINAVILLSVLSVANGAFYTSSR 458

  Fly   345 CMYAMASDGLLFSCFGKINPTTQVPLLNLVVS---GVMSACLALVFDLAKLVEFMSI-GTLLAYT 405
            .:.::|..|....||..|:...: |...::||   ||::.|.:...:.......::| |....:|
Yeast   459 ILMSLAKQGNAPKCFDYIDREGR-PAAAMLVSALFGVIAFCASSKKEEDVFTWLLAISGLSQLFT 522

  Fly   406 IVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSEMIEEVLAGRLK 470
            .::..:..:|:|         |...|.|.      ...:|..:|.:........::..|||  |.
Yeast   523 WITICLSHIRFR---------RAMKVQGR------SLGEVGYKSQVGVWGSAYAVLMMVLA--LI 570

  Fly   471 AQF-RCLEPLLGRFEPGSVVSVAVMLFIFLSFAICVELKVSWTQLYT--GTW---WALII 524
            ||| ..:.|:.|    |..:|.......:|:..|       |..||.  ..|   |:|.|
Yeast   571 AQFWVAIAPIGG----GGKLSAQSFFENYLAMPI-------WIALYIFYKVWKKDWSLFI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 110/560 (20%)
AA_permease_C 551..601 CDD:290617
GNP1NP_010796.1 2A0310 146..626 CDD:273334 108/547 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345716
Domainoid 1 1.000 76 1.000 Domainoid score I2106
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.800

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