DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and AGP3

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_116600.1 Gene:AGP3 / 850489 SGDID:S000001839 Length:558 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:114/525 - (21%)
Similarity:193/525 - (36%) Gaps:121/525 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGP-GIILSFILAGFISMLAALCYAEFG 95
            :|.:.|.|....|:||.:|.::|.|..|..|. |....|| .::|.|.:.|.|:........|..
Yeast    46 QTGVKRALKNRHISLLALGGVIGPGCLVGAGN-ALNKGGPLALLLGFSIIGIIAFSVMESIGEMI 109

  Fly    96 TRVPKAG---------------SAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWS----- 140
            |..|..|               :...|.|:        |:.:.:|.......:|:.:.|.     
Yeast   110 TLYPSGGGFTTLARRFHSDALPAVCGYAYV--------VVFFAVLANEYNTLSSILQFWGPQVPL 166

  Fly   141 -GYVDSMLGGWIGNTTLELTG----GIHE--------PGLAQYPDVLAFLVCIVYAAALAGGVKA 192
             ||:   |..|......:|.|    |..|        .||..|     ::..|||   ::|.::.
Yeast   167 YGYI---LIFWFAFEIFQLVGVGLFGETEYWLAWLKIVGLVAY-----YIFSIVY---ISGDIRN 220

  Fly   193 TAVFNSLLTLVNIAVMVLVISVGFWYADGKNWSEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIA 257
            ...|                  ||.|     |:..  |.|.:|..|:......|...:.|.:|:|
Yeast   221 RPAF------------------GFHY-----WNSP--GALSHGFKGIAIVFVFCSTFYSGTESVA 260

  Fly   258 TSGEEAKNPSVSIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASL-----PEAFGQLNLS 317
            .:..|:|||..::|:|...:|:.:.|.||.::......:|..:.|.:||.     |.|.......
Yeast   261 LAATESKNPGKAVPLAVRQTLWRILVVYIGIAVFYGATVPFDDPNLSASTKVLKSPIAIAISRAG 325

  Fly   318 WA--KYLISIGALCGMTTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQ---VPLLNLVVSG 377
            ||  .:|::...|....:.:.|||:...|.:..:|.:||.    .||...|.   ||:..:.   
Yeast   326 WAGGAHLVNAFILITCISAINGSLYIGSRTLTHLAHEGLA----PKILAWTDRRGVPIPAIT--- 383

  Fly   378 VMSACLALVFDLAKLVEFM--SIGTLLAYTIV---SASVIILRYRPMERIHTTIRVPAVAGSPDD 437
                    ||:...|:..|  |:|...||:.:   |...:.:.:..:...|..||...||     
Yeast   384 --------VFNALGLISLMNVSVGAANAYSYIVNLSGVGVFIVWGVISYTHLRIRKAWVA----- 435

  Fly   438 DDDDDEDVASQSSMDTSSPTSEMIEEVLAGRLKAQFRCLEPLLGRFEPGSVVSVAVML--FIFLS 500
            .....|::..::.....:|...:...:....::. :....|    |:.|:.|...::|  .|.|.
Yeast   436 QGRSIEELPYEALFYPWTPVLSLAANIFLALIQG-WSYFVP----FDAGNFVDAYILLPVGILLY 495

  Fly   501 FAICV 505
            ..|||
Yeast   496 IGICV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 114/525 (22%)
AA_permease_C 551..601 CDD:290617
AGP3NP_116600.1 2A0310 50..517 CDD:273334 113/521 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I2106
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 90 1.000 Inparanoid score I1545
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
76.900

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