DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and CAT4

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001154586.1 Gene:CAT4 / 821176 AraportID:AT3G03720 Length:600 Species:Arabidopsis thaliana


Alignment Length:577 Identity:188/577 - (32%)
Similarity:321/577 - (55%) Gaps:32/577 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFILAGFISMLAALCYAEFGTRVP 99
            |.:.|:..|:..:|:|..:|||:|:|.||||:|..||.:.:||.:||..:.|:|.||||..:|.|
plant    24 LAKKLSAVDLVAIGVGTTIGAGVYILVGTVAREHTGPALAVSFFIAGVAAALSACCYAELASRCP 88

  Fly   100 KAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYVDSMLGG------WIGNTTLEL 158
            .|||||.|.||.:||..|:::||.::|::.:|.:::||..:..:.|..||      ::...|:  
plant    89 SAGSAYHYAYICLGEGIAWLVGWALVLDYTIGGSAIARGITPNLASFFGGLDNLPVFLARQTI-- 151

  Fly   159 TGGIHEPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLVISVGFWYADGKN 223
                  ||:....|..|.|:.::....|..|:|.::...:::|.||:..:|.:|.||.:.|....
plant   152 ------PGVGIVVDPCAALLIMIVTILLCFGIKESSTVQAIVTSVNVCTLVFIIVVGGYLACKTG 210

  Fly   224 W--SEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATVISLFVVTVGYI 286
            |  .:...|:.|:|:.|::||:|..|::::|||::.::.||.|||...:|:...|:|.:..:.|:
plant   211 WVGYDLPSGYFPFGLNGILAGSAVVFFSYIGFDTVTSTAEEVKNPQRDLPLGIGIALLICCILYM 275

  Fly   287 LVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGALCGMTTTLLGSLFALPRCMYAMAS 351
            |:|..:..::|...:||...:..|||...:.||.|:::.||:..:..:|||||.|.||...|||.
plant   276 LLSVVIVGLVPYYSLNPDTPISSAFGDSGMQWAAYILTTGAITALCASLLGSLLAQPRIFMAMAR 340

  Fly   352 DGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVEFMSIGTLLAYTIVSASVIILRY 416
            ||||.:.|.:|:|.||||:.:.:..||::|.||...|:|:|.|.:|:|||:|:|.|:..|::|||
plant   341 DGLLPAFFSEISPRTQVPVKSTIAIGVLAAALAFFMDVAQLSEMVSVGTLMAFTAVAVCVLVLRY 405

  Fly   417 RPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSEMIEEVLAGRLKAQFRCLEPLLG 481
            .|.:      .||..:.|....|.|:....:::.:..:..:|   :..|.|...|:.   |...|
plant   406 VPPD------GVPLSSSSQTLSDTDESRAETENFLVDAIESS---DSPLLGNETARD---EKYFG 458

  Fly   482 RFEPGSVVSVAVMLF--IFLSFAICVELKVSWTQLYTGTWWALIIYGFIIFAAGTCVAVIAVHNQ 544
            :....:..|:|::..  :.|:.|...|...|:.:.......|:|:.|.:| ..|........||.
plant   459 KRRKIAAWSIALVCIGVLGLASAASAERLPSFPRFTICGVSAVILLGSLI-TLGYIDEDEERHNF 522

  Fly   545 NTRGLIFKVPLVPFVPALGIFCNILLMVHLDAVTWVRFFVWVCIGMVVYFLYGIRNS 601
            ..:| .|..|.||::|.|.|..|..|::::.|.||:|..:|:.||.::|..||..:|
plant   523 GHKG-GFLCPFVPYLPVLCILINTYLIINIGAGTWIRVLIWLLIGSMIYIFYGRSHS 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 188/577 (33%)
AA_permease_C 551..601 CDD:290617 19/49 (39%)
CAT4NP_001154586.1 2A0303 4..579 CDD:273330 188/577 (33%)
AA_permease_C 528..578 CDD:290617 19/49 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 307 1.000 Domainoid score I322
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I609
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - mtm1003
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - O PTHR43243
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X81
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

Return to query results.
Submit another query.