DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and slc7a4

DIOPT Version :10

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001072820.1 Gene:slc7a4 / 780281 XenbaseID:XB-GENE-960138 Length:337 Species:Xenopus tropicalis


Alignment Length:326 Identity:164/326 - (50%)
Similarity:232/326 - (71%) Gaps:4/326 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CTKMNRTKSVPTDVMETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFILAG 81
            |.|:||.|::..|:|||.|.|||:|.|:.|||:|.|||:|:||||||||||:|||.:|:||::||
 Frog    15 CQKLNRVKTLEDDLMETSLKRCLSTIDLTLLGVGGMVGSGLYVLTGTVAKEIAGPAVIISFLIAG 79

  Fly    82 FISMLAALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYVDSM 146
            ..|:||||||||||.||||.||||::||:|:||.|||:||||::||:|:|.|:||||||||:|||
 Frog    80 VASLLAALCYAEFGARVPKTGSAYMFTYVSVGEIWAFLIGWNVILEYMIGGAAVARAWSGYLDSM 144

  Fly   147 LGGWIGNTTLELTGGIHEPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLV 211
            ....|.|.|....|..:...||.|||.||..:.:|..|.::.||:.::..|.:...:::.:::.:
 Frog   145 FDHKIKNYTETHVGSWNVQFLAHYPDFLAAGILLVATAFISFGVRVSSWLNHIFAGISMGIILFI 209

  Fly   212 ISVGFWYADGKNWSEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATVI 276
            :..||..|:.|||....|||.|:|..|:::|.|||||||||||.||.|.||||||..::|:||.:
 Frog   210 LIFGFILAEPKNWGPENGGFAPFGFSGIMSGTATCFYAFVGFDVIAASSEEAKNPQKAVPIATAV 274

  Fly   277 SLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGALCGMTTTLLGSLFA 341
            ||.:.|..|.|||..||||:|.:.:.|.::|.:||.:...|||.::::.|::||.    ..::|.
 Frog   275 SLGLATAAYFLVSTVLTLMVPWNTLVPDSALSDAFYRRGYSWAGFIVAAGSICGR----FNNIFC 335

  Fly   342 L 342
            |
 Frog   336 L 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 157/311 (50%)
slc7a4NP_001072820.1 2A0303 11..>333 CDD:273330 162/321 (50%)

Return to query results.
Submit another query.