DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and slc7a6

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_005166451.1 Gene:slc7a6 / 57957 ZFINID:ZDB-GENE-000607-21 Length:494 Species:Danio rerio


Alignment Length:585 Identity:127/585 - (21%)
Similarity:221/585 - (37%) Gaps:122/585 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KMNRTKSVPTDVMETPLNRCLNTFDIALLG-----IGHMVGAGIYVLTGTVAKEMAGPGI-ILSF 77
            |||.....|. .:..|........:|:||.     :|:|:|:||:|....|....|..|: ::.:
Zfish     9 KMNGQPESPA-ALSKPRESMQLKKEISLLNGVSLIVGNMIGSGIFVSPKGVLIYSASYGLSLVIW 72

  Fly    78 ILAGFISMLAALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGW-NILLEHMLGAASVARAWSG 141
            .:.|..|::.||||||.||.:.|:|::|.|...|.|.|.||:..| ::|:......|.:|..::.
Zfish    73 AIGGIFSVVGALCYAELGTTITKSGASYAYILESFGGFIAFIRLWTSLLIIEPTSQAVIAITFAN 137

  Fly   142 YVDSMLGGWIGNTTLELTGGIHEPGLAQYPDVLAFLVCI---VYAAALAGGVKATAVFN--SLLT 201
            |:...|....            ||..:....:.|..:|:   :.:|.:..|.:...||.  .:|.
Zfish   138 YLVQPLFPTC------------EPPYSASRLIAAACICLLTFINSAYVKWGTRVQDVFTYAKVLA 190

  Fly   202 LVNIAVMVLV-ISVGFW--YADGKNWSEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEA 263
            |:.|.:..:| :..||.  :.|....|..:       .||:.....:..:::.|:|::....||.
Zfish   191 LIVIIITGIVKLCQGFTINFEDSFQGSSRD-------PGGIALALYSALFSYSGWDTLNFVTEEI 248

  Fly   264 KNPSVSIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGAL 328
            |||..::|::..||:.:||:.|||.:.|...::.:|.|..:.::...|....|....:.|.|...
Zfish   249 KNPERNLPLSIAISMPIVTIIYILTNVAYYAVLDMSAILASDAVAVTFADHTLGVMSWTIPIAVA 313

  Fly   329 CGMTTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLV 393
            ......|..|:.|..|..:..|.:|.|......|:.....|:..|:.:..|:.....|.|:.:|:
Zfish   314 LSCYGGLNSSIIAASRLFFVGAREGHLPDALSMIHIERFTPVPALLFNCAMALIYLTVEDVFQLI 378

  Fly   394 EFMSIGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTS 458
            .:.|........:..|..|.||::                                         
Zfish   379 NYYSFSYWFFVGLSIAGQIYLRWK----------------------------------------- 402

  Fly   459 EMIEEVLAGRLKAQFRCLEPLLGRFEPGSVVSVAVMLFIFLSFAICVELKVSWTQLYTGTWWALI 523
                                     ||.....:.:.|...:.|.:||...|: ..||:.|..:||
Zfish   403 -------------------------EPDRPRPLKLSLVYPIIFCLCVVFLVA-VPLYSDTLNSLI 441

  Fly   524 IYGFIIFAAGTCVAVIAVHNQNTRGLIFKVPLVPFVPALGIFCNILLMVHLDAVTWVRFFVWVCI 588
              |..|..:|..|..:.:|...:     |.|  |.:..|           |.|:|....|...|:
Zfish   442 --GIAIALSGVPVYFLGIHLPES-----KRP--PIITKL-----------LSAITRFTQFTCFCV 486

  Fly   589  588
            Zfish   487  486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 123/572 (22%)
AA_permease_C 551..601 CDD:290617 9/38 (24%)
slc7a6XP_005166451.1 2A0308 2..489 CDD:273332 127/585 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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