DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG13248 and CG1607

DIOPT Version :9

Sequence 1:	NP_649219.1	Gene:	CG13248 / 40254	FlyBaseID:	FBgn0036984	Length:	669	Species:	Drosophila melanogaster
Sequence 2:	NP_001263139.1	Gene:	CG1607 / 43707	FlyBaseID:	FBgn0039844	Length:	507	Species:	Drosophila melanogaster

Alignment Length:	418	Identity:	104/418 - (24%)
Similarity:	178/418 - (42%)	Gaps:	82/418 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    49 IGHMVGAGIYV-------LTGTVAKEMAGPGIILSFILAGFISMLAALCYAEFGTRVPKAGSAYV 106
            :|.::|:||:|       .||:|  .:|    ::.::::|..||:.|.||||.||.:.|:|:.|.
  Fly    59 VGSIIGSGIFVSPTGVLMYTGSV--NLA----LIVWVISGLFSMVGAYCYAELGTMITKSGADYA 117

  Fly   107 YTYISMGEFWAFVIGWNILLEHML----GAASVARAWSGYVDSMLGGWIGNTTLELTGGIHEPGL 167
            |...:.|.|.||:..|   :|.|:    ..|.||..:|.||   |..:....|         |
  Fly   118 YIMETFGPFMAFIRLW---IECMIVRPCSQAIVALTFSTYV---LKPFFPECT---------P-- 165

  Fly   168 AQYPDVLAFL--VCIVYAAALAG--GVK-ATAVFNSLLTLVNIAVMVLVISVGFW--YADGKNWS 225
               |:..|.|  ||.:....|..  .|| |||| ..:.|...:..:.::|:.|.:  |.....:.
  Fly   166 ---PEDSARLLAVCCILVLTLINCWDVKWATAV-QDIFTYAKLLALFIIIATGVYQLYLGNTQYF 226

  Fly   226 EAEGGFLPYGVGGVIAGAATCFY----AFVGFDSIATSGEEAKNPSVSIPVATVISLFVVTVGYI 286
            ..|      .....:...|..||    |:.|::.:....||.|:|..::|.|..||..:||:.|:
  Fly   227 TFE------NTDTKVTSIALSFYSGLFAYNGWNYLNFIIEELKDPVKNLPRAIAISCTLVTIVYV 285

  Fly   287 LVSAALTLMIPISEINPAASL-----PEAFGQLNLSWAKYLISIGALCGMTT--TLLGSLFALPR 344
            :.:.:...::...|:..::::     ..|||.  |:|     :|.....::|  .:.|.|....|
  Fly   286 MANVSFYTILSPDEVMGSSAVAVTYAERAFGM--LAW-----TIPVFVALSTFGAVNGILLTSSR 343

  Fly   345 CMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVEFMSIGTLLAYTIVSA 409
            ..||.|::|.:......|......|...::...::|.....|.|:..|:.::...|.|:..:...
  Fly   344 LFYAGANNGQMPEILTMIQIQRFTPTPAVLAMALLSMLYLTVSDIFALINYVGFATWLSIGVAVL 408

  Fly   410 SVIILRY------RPMERIHTTIRVPAV 431
            .:..||:      ||       ||||.|
  Fly   409 CLPWLRWAQPNLPRP-------IRVPMV 429

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG13248	NP_649219.1	2A0303	32..603	CDD:273330	104/418 (25%)
CG13248	NP_649219.1	AA_permease_C	551..601	CDD:290617
CG1607	NP_001263139.1	2A0308	42..501	CDD:273332	104/418 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466559
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840