DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and slif

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_649428.1 Gene:slif / 40510 FlyBaseID:FBgn0037203 Length:604 Species:Drosophila melanogaster


Alignment Length:645 Identity:247/645 - (38%)
Similarity:366/645 - (56%) Gaps:72/645 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LSGICTKMNRTKSVPTDVMETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSF 77
            ::.:...:.|.|:...:..|:.|.|.||.||:..||:|..:|.|:|||.|.||..:|||.:.:||
  Fly     1 MTNLWKALTRRKTEDVNEGESQLARVLNLFDLTALGVGSTLGLGVYVLAGQVAFNIAGPAVTISF 65

  Fly    78 ILAGFISMLAALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGY 142
            ::|...|..|.:|||||..|||||||||||:|:::|||.||.||||::||:::|.|||||..|||
  Fly    66 LIAAIASAFAGICYAEFAARVPKAGSAYVYSYVTIGEFVAFTIGWNLILEYVIGTASVARGLSGY 130

  Fly   143 VDSMLGGWIGNTTLELTGGIH--EPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNI 205
            .||::.   .|.:..|...:|  ...|..|||.|:|.:.::.||.||.|.|.::..|::.|.||:
  Fly   131 FDSLIN---NNMSKALNESMHIDVDFLGDYPDFLSFGMVLLLAAILAFGAKESSFLNNIFTTVNL 192

  Fly   206 AVMVLVISVGFWYADGKNW---------SEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGE 261
            ..:.:|:..|...|:..||         ....|||:|:|:.||:||||.|||.|||||.|||:||
  Fly   193 VTIAIVLVAGAMNANVDNWRIPKKDVPEGFGTGGFMPFGIAGVMAGAAKCFYGFVGFDCIATTGE 257

  Fly   262 EAKNPSVSIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIG 326
            ||.||..:||::.|:||.::.:.|..||..||:|:|..:.:..|..|.||..:.....|::::||
  Fly   258 EAINPKRNIPLSIVVSLIIIFLSYFGVSTVLTMMLPYYKQDKDAPFPHAFDSVEWYTIKWIVTIG 322

  Fly   327 ALCGMTTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAK 391
            |:..:.|:|||::|.|||.:|||..||:||.....:|..|:.|||..:|||:.::.:|::|:|.:
  Fly   323 AVFALCTSLLGAMFPLPRILYAMGKDGILFKRLSTVNSYTKTPLLATIVSGIFASIMAMLFNLDQ 387

  Fly   392 LVEFMSIGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSP 456
            ||:.||||||||||||:..|::|||:                        ||::....|:...: 
  Fly   388 LVDMMSIGTLLAYTIVAICVLVLRYQ------------------------DEEMTKLVSVKAPN- 427

  Fly   457 TSEMIEEVLAGRLKAQFRCLEPLLGRFEPGSVVS----VAVMLFIFLSFAICVELKVSWTQLYTG 517
               :..:...|.   .||         ||.|:.|    |.:::|.......|...|| :....||
  Fly   428 ---VFRQFFNGN---SFR---------EPNSMTSSITKVGIVVFAIFCLVWCSLQKV-FDLDSTG 476

  Fly   518 TWWALIIYGFIIFAAGTCVAVIAVHNQNTRGLIFKVPLVPFVPALGIFCNILLMVHLDAVTWVRF 582
            ...||.:.|.::..  .|| ||.:...:|..|.||||||||||.|.:|.|:.||..||..||:||
  Fly   477 GIVALSLVGAVLIL--ICV-VIGMQPVSTIELTFKVPLVPFVPCLSVFANLYLMFQLDLNTWIRF 538

  Fly   583 FVWVCIGMVVYFLYGIRNSKEGEVCSSYSILMTTS--------EAGKVPWGSFKATSGGK 634
            .:|:.||.|:||.||:|||.:.....|::.:..::        ..|..|  .:|..:||:
  Fly   539 LIWIVIGYVIYFCYGMRNSTQISRSRSHAEVAASALQNQGQHVNPGFEP--DYKVENGGR 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 239/585 (41%)
AA_permease_C 551..601 CDD:290617 30/49 (61%)
slifNP_649428.1 2A0303 8..557 CDD:273330 239/595 (40%)
AA_permease_C 507..557 CDD:290617 30/49 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466574
Domainoid 1 1.000 307 1.000 Domainoid score I322
eggNOG 1 0.900 - - E2759_KOG1286
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I609
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - mtm14985
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - P PTHR43243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
1110.820

Return to query results.
Submit another query.