DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and CG5535

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_649019.2 Gene:CG5535 / 39990 FlyBaseID:FBgn0036764 Length:630 Species:Drosophila melanogaster


Alignment Length:648 Identity:243/648 - (37%)
Similarity:378/648 - (58%) Gaps:82/648 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TKSVP-TDVMETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFILAGFISML 86
            |:..| .|..|:.|.:.|:.||:..||||..:|.|:|||.|.|:|:.|||.:::||::|...|:.
  Fly    23 TRKKPLEDSNESKLAKVLSAFDLTALGIGSTLGVGVYVLAGEVSKQYAGPAVVVSFLIAAIASIF 87

  Fly    87 AALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYVDSMLGGWI 151
            |.|||||||.|||||||||:|:|:::|||.||:||||::||:.:|:|||.:..|.|:|.:.|..:
  Fly    88 AGLCYAEFGARVPKAGSAYIYSYVTIGEFIAFLIGWNLILEYAIGSASVVKGLSTYLDQLCGNPM 152

  Fly   152 GNTTLELTGGIHEP----GLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLVI 212
            .:..     |.|.|    |:..|||:.||:|.|:::.|:|.|.|.:...|::.|::|:.|::.||
  Fly   153 SSFL-----GTHMPLNIEGMGAYPDLFAFVVTILFSLAIAVGAKESTRVNNVFTMLNLGVVLFVI 212

  Fly   213 SVGFWYADGKNWS---------EAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSV 268
            ..|.:.....|||         ..:|||:||||.|:|.|||.|||.|:|||.|||:|||||||..
  Fly   213 IAGLFKVSSSNWSIPKSQVPEGYGDGGFMPYGVSGIIKGAAVCFYGFIGFDCIATAGEEAKNPKK 277

  Fly   269 SIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSW--AKYLISIGALCGM 331
            |||.|.::||.::.:.|..||..||:|:|..|.:..|.||..| ::| .|  |:|::||||:.|:
  Fly   278 SIPFAVIVSLAMIFLAYFGVSTVLTMMLPYFEQDEKAPLPHVF-RIN-GWHVAEYVVSIGAMFGL 340

  Fly   332 TTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVEFM 396
            .::::|::|.|||.::||::|||||...|.|:...:.|....:::|:::..||.||:|::||..|
  Fly   341 CSSMMGAMFPLPRIVFAMSNDGLLFKFLGDISEKYKTPFKGTMITGMLTGILAAVFNLSQLVNMM 405

  Fly   397 SIGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSEMI 461
            ||||||||::|::.|::|||...:|..:.|.....|...:.|                       
  Fly   406 SIGTLLAYSMVASCVLMLRYEVDDRRESRIVANGRATGLEQD----------------------- 447

  Fly   462 EEVLAGRLKAQFRCLEPLLGRFEP----GSVVSVAVMLF-----IFLSFAICVELKVSWTQLYTG 517
                  |..|.:|.:..|.|:..|    ..:|:.:|.||     :|.......|..::....:.|
  Fly   448 ------RPCALWRRIFNLNGQTVPTKQTSRIVTYSVTLFSLWCMVFSQILTKFEEDLANVTSFDG 506

  Fly   518 TWWALIIYGFIIFAAGTCVAVIAVHNQNTRG--LIFKVPLVPFVPALGIFCNILLMVHLDAVTWV 580
               ..::.|.|..|    |.::.:..|.|.|  |.|||||||::|.:.|..||.||:.||.:||:
  Fly   507 ---IKLVLGTIPLA----VLLLVISRQPTSGVKLSFKVPLVPWLPGISILINIYLMIKLDILTWI 564

  Fly   581 RFFVWVCIGMVVYFLYGIRNSK---EGEVCSSYSILMTTSEAGKVPWGSFKATSGGKKSSKHS 640
            ||.:|:.||:.::..||||:|:   ..:..:|.:::...|.:         |..||:::||:|
  Fly   565 RFSIWIAIGLAIFLAYGIRHSRLRQREQRNNSIAMMRDCSNS---------ALLGGQENSKYS 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 232/599 (39%)
AA_permease_C 551..601 CDD:290617 26/49 (53%)
CG5535NP_649019.2 2A0303 20..585 CDD:273330 234/604 (39%)
AA_permease_C 535..585 CDD:290617 26/49 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466573
Domainoid 1 1.000 307 1.000 Domainoid score I322
eggNOG 1 0.900 - - E2759_KOG1286
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 352 1.000 Inparanoid score I609
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - mtm14985
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - P PTHR43243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
1110.820

Return to query results.
Submit another query.