DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and Slc7a13

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001012100.1 Gene:Slc7a13 / 313089 RGDID:1311633 Length:479 Species:Rattus norvegicus


Alignment Length:561 Identity:121/561 - (21%)
Similarity:201/561 - (35%) Gaps:160/561 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 HMVGAGIYVL-TGTVAKEMAGPGIILS-FILAGFISMLAALCYAEFGTRVPKAGSAYVYTYISMG 113
            :::||||:|. .|.:.......|:.|. ::....:||.:.||.||.|...|...:.|.:.....|
  Rat    27 NIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFG 91

  Fly   114 EFWAFVIGWNILLEHMLGAASVARAWSGYVDSMLGGWIGNTTLELTGGIHEPGLAQYPDVLAFLV 178
            .|.||:..|..|.......||.|...:.|                  || :|   .||...|..|
  Rat    92 PFVAFLRLWTSLFTGPGVLASQALLLAEY------------------GI-QP---FYPSCSAPAV 134

  Fly   179 ---CIVYAAA-LAG-----GVKATAVFNSLLTLVNIAVMVLVISVG-FWYADGK--------NWS 225
               |:..|.. :.|     |||..:...::..::.:.::..:...| |....|:        |..
  Rat   135 PKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAF 199

  Fly   226 EAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATVISLFVVTVGYILVSA 290
            :||...:...:..:..|    ::||.|..|......|.|.||.:||.....:|.:|||.|:|.:.
  Rat   200 DAEFPEVSRLIEAIFQG----YFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANL 260

  Fly   291 A-LTLMIPISEINPAA--------SLPEAFGQLNLSWAKYLISIGALCGMTTTLLGSLFALPRCM 346
            : ||::.|...::..|        .:|:      |:|:   :.......:.:.|:.|:|...|..
  Rat   261 SYLTVLSPQELLSSDAVALTWTDRVIPQ------LTWS---VPFAISASLFSNLVTSVFETSRTS 316

  Fly   347 YAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVEFMSIGTLLAYTIVSASV 411
            |..:.:|             |:|||...::...|..:|::.|    |...||..:|...|...:.
  Rat   317 YIASRNG-------------QLPLLCSTLNVHSSPFIAVLLD----VSMGSIAIVLTNLIELINY 364

  Fly   412 IILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSEMIEEVLAGRLKAQFRCL 476
            :...:    .|.|.:.|                                     .|.||.:::  
  Rat   365 LFFVF----SIWTVLSV-------------------------------------IGILKLRYQ-- 386

  Fly   477 EPLLGR----FEPGSVVSVAVMLFIFLSFAICVELKVSWTQLYTGTWWALIIYGFIIFAAGTCVA 537
            ||.|.|    |.|...::.|:.|.:.|     :.|..|....|        ||.|:.|..     
  Rat   387 EPNLHRPYKVFSPFLFITAAISLSMVL-----IPLIKSPKMQY--------IYVFLFFLG----- 433

  Fly   538 VIAVHNQNTRGLIFKVPLVPFVPALGIF----CNILLMVHL 574
                      ||:|.|||:.|...|..|    |.:.|:.::
  Rat   434 ----------GLLFYVPLIHFKLKLIWFQKLTCYLQLLFNI 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 121/561 (22%)
AA_permease_C 551..601 CDD:290617 9/28 (32%)
Slc7a13NP_001012100.1 PotE 11..454 CDD:223605 119/549 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.