DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and SPOM_SPBC359.01

DIOPT Version :10

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_595051.2 Gene:SPOM_SPBC359.01 / 2540923 PomBaseID:SPBC359.01 Length:581 Species:Schizosaccharomyces pombe


Alignment Length:537 Identity:113/537 - (21%)
Similarity:198/537 - (36%) Gaps:157/537 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFILAGFISMLAALCYAEFGTRVP 99
            |.|.|.:..:.::.:|..:|:|:||.:|:...:.....:|:::||.|.:.:.......|.....|
pombe    73 LKRKLTSRHMQMISVGGAIGSGLYVGSGSAFADGGPASVIINYILIGIMMIFVIYALGELAIAYP 137

  Fly   100 KAGSAYVYTYISMGEFWAFVIGWNILLEHM----LGAASVARAWSGYVDSMLGGWIGNTTLELTG 160
            .|||...|....:...|.|.:.||..|.:.    |...:.|..:..:.:.....|| :..|.:..
pombe   138 VAGSFNTYATRFIDPAWGFAVSWNYFLNYFVTCPLELTTCAITFKFWTEINSAAWI-SIFLAVVI 201

  Fly   161 GIHEPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLVISVGFWYADGKNWS 225
            .|:..|:..|.:| .|::..:...|..|.:                ::.::|:.|....|.:.:.
pombe   202 VINLFGVRAYGEV-EFILSTIKVIATVGFI----------------ILAIIINCGGVPTDHRGYI 249

  Fly   226 EAEGGFL----PY--GVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATV-----ISLF 279
               ||.:    |:  |..|..:...|..::|.|.:.|..:..|..||..|:|.|..     |::|
pombe   250 ---GGSIIKQKPFRHGFKGFCSVFTTAAFSFSGTEIIGLAAAEVGNPRKSVPSAVKQVFWRIAIF 311

  Fly   280 VVTVGYILVSAALT----------------LMIPISEINPAASLPEAFGQLNLSWAKYLISIGAL 328
            .| |..||:...::                .::.|.|.| ...||..|.      |..:||:.::
pombe   312 YV-VSLILIGLLVSPDDPRLMGNGDVSVSPFVLAIQEAN-IKGLPSVFN------AVIIISVVSV 368

  Fly   329 CGMTT-----TLLG--SLFALP----------RCMYAMASDGLLFSCFGKINPTTQVPLLN---- 372
            ...||     ||.|  :|...|          |.:.||.. .|||..|..||...:    |    
pombe   369 TNSTTYTAARTLQGMATLKQAPKFFSYTDRVGRPLIAMVV-VLLFGFFAYINEADK----NGSDI 428

  Fly   373 --------LVVSGVM------SACLA-LVFDLA--------KLVEFMS--------IG------T 400
                    |.:||:.      |.||: ::|.||        |.:.|:|        ||      .
pombe   429 SDTVFDWLLAISGLSSFFTWGSICLSHIMFRLAFKKQGHSLKELGFVSPMGIWGSVIGLGFNILC 493

  Fly   401 LLAYTIVS----------------------ASVIILRYRPMERIHTTIRVPAV--------AGSP 435
            |:|...||                      |....:.|:..:|.|    :|::        ..:.
pombe   494 LMAEFYVSLFLIGGSPNANDFFQGYLAACIALAFFIGYKIYDRSH----IPSLDKLDIDTGLKTY 554

  Fly   436 DDDDDDDEDVASQSSMD 452
            |:.|::.|:.:|:..::
pombe   555 DNQDEEKEEYSSKGPLN 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 113/537 (21%)
SPOM_SPBC359.01NP_595051.2 AA_permease_2 74..548 CDD:459263 108/511 (21%)

Return to query results.
Submit another query.