DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and SPBC359.01

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_595051.2 Gene:SPBC359.01 / 2540923 PomBaseID:SPBC359.01 Length:581 Species:Schizosaccharomyces pombe


Alignment Length:534 Identity:114/534 - (21%)
Similarity:198/534 - (37%) Gaps:151/534 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFILAGFISMLAALCYAEFGTRVP 99
            |.|.|.:..:.::.:|..:|:|:||.:|:...:.....:|:::||.|.:.:.......|.....|
pombe    73 LKRKLTSRHMQMISVGGAIGSGLYVGSGSAFADGGPASVIINYILIGIMMIFVIYALGELAIAYP 137

  Fly   100 KAGSAYVYTYISMGEFWAFVIGWNILLEHM----LGAASVARAWSGYVDSMLGGWIGNTTLELTG 160
            .|||...|....:...|.|.:.||..|.:.    |...:.|..:..:.:.....|| :..|.:..
pombe   138 VAGSFNTYATRFIDPAWGFAVSWNYFLNYFVTCPLELTTCAITFKFWTEINSAAWI-SIFLAVVI 201

  Fly   161 GIHEPGLAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLVISVGFWYADGKNWS 225
            .|:..|:..|.:| .|::..:...|..|.:                ::.::|:.|....|.:.:.
pombe   202 VINLFGVRAYGEV-EFILSTIKVIATVGFI----------------ILAIIINCGGVPTDHRGYI 249

  Fly   226 EAEGGFL----PY--GVGGVIAGAATCFYAFVGFDSIATSGEEAKNPSVSIPVATV-----ISLF 279
               ||.:    |:  |..|..:...|..::|.|.:.|..:..|..||..|:|.|..     |::|
pombe   250 ---GGSIIKQKPFRHGFKGFCSVFTTAAFSFSGTEIIGLAAAEVGNPRKSVPSAVKQVFWRIAIF 311

  Fly   280 VVTVGYILVSAALT----------------LMIPISEINPAASLPEAFGQLNLSWAKYLISIGAL 328
            .| |..||:...::                .::.|.|.| ...||..|.      |..:||:.::
pombe   312 YV-VSLILIGLLVSPDDPRLMGNGDVSVSPFVLAIQEAN-IKGLPSVFN------AVIIISVVSV 368

  Fly   329 CGMTT-----TLLG--SLFALP----------RCMYAMASDGLLFSCFGKINPT---------TQ 367
            ...||     ||.|  :|...|          |.:.||.. .|||..|..||..         |.
pombe   369 TNSTTYTAARTLQGMATLKQAPKFFSYTDRVGRPLIAMVV-VLLFGFFAYINEADKNGSDISDTV 432

  Fly   368 VPLLNLVVSGVM------SACLA-LVFDLA--------KLVEFMS--------IG------TLLA 403
            ...| |.:||:.      |.||: ::|.||        |.:.|:|        ||      .|:|
pombe   433 FDWL-LAISGLSSFFTWGSICLSHIMFRLAFKKQGHSLKELGFVSPMGIWGSVIGLGFNILCLMA 496

  Fly   404 YTIVS----------------------ASVIILRYRPMERIHTTIRVPAV--------AGSPDDD 438
            ...||                      |....:.|:..:|.|    :|::        ..:.|:.
pombe   497 EFYVSLFLIGGSPNANDFFQGYLAACIALAFFIGYKIYDRSH----IPSLDKLDIDTGLKTYDNQ 557

  Fly   439 DDDDEDVASQSSMD 452
            |::.|:.:|:..::
pombe   558 DEEKEEYSSKGPLN 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 114/534 (21%)
AA_permease_C 551..601 CDD:290617
SPBC359.01NP_595051.2 LysP 29..580 CDD:223903 114/534 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
TreeFam 00.000 Not matched by this tool.
32.910

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