DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13248 and C50D2.2

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_493662.1 Gene:C50D2.2 / 183650 WormBaseID:WBGene00016806 Length:589 Species:Caenorhabditis elegans


Alignment Length:638 Identity:297/638 - (46%)
Similarity:403/638 - (63%) Gaps:89/638 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SGICTKMNRTKSVPTDVMETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIILSFI 78
            |.:..::.|.|::|...:.|||.|||:||||.|||:|||:|||||||||:|.:..|||.|||||:
 Worm     4 SALRERVFRLKNLPAGEIATPLRRCLSTFDITLLGVGHMIGAGIYVLTGSVVRNTAGPSIILSFL 68

  Fly    79 LAGFISMLAALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYV 143
            ||||.|:|:||||||||.|.|||||||.|||:.:||.|||||||||:||||||||:|||:||||:
 Worm    69 LAGFASLLSALCYAEFGARFPKAGSAYTYTYVGVGELWAFVIGWNIILEHMLGAAAVARSWSGYL 133

  Fly   144 DSMLGGWIGNTTLELTGGIHEPG--LAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIA 206
            ||:||..|.|:|:..||.:||..  ...|||:||||:.::.|..:|.|.|.:..|||.||::||.
 Worm   134 DSLLGNVISNSTIARTGHLHEASSFFGDYPDLLAFLLIVLVAFFVALGSKVSTNFNSFLTILNIG 198

  Fly   207 VMVLVISVGFWYADGKNWS----EAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAKNPS 267
            ::|:|:..|..:||...||    :....|.||||.|:.||||:||:|::|||.:||:|||||:|:
 Worm   199 IVVIVVFYGITFADFSLWSGVDEKGNSRFFPYGVSGMFAGAASCFFAYIGFDGLATAGEEAKDPA 263

  Fly   268 VSIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGALCGMT 332
            .|||:||..|:.:||:.|:|:||:||||||.:.::|.|:..:||......:|.|.:|:|||.|||
 Worm   264 RSIPIATFSSMTIVTLSYVLMSASLTLMIPYNMVHPTAAFSDAFTMRGAEFASYAVSVGALFGMT 328

  Fly   333 TTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVEFMS 397
            |:|:|.:||||||:::||.||||||....:||.||||...|::.|.::|.:||:||:..||||:|
 Worm   329 TSLVGGMFALPRCVFSMADDGLLFSSLASVNPKTQVPTQALLIFGFLTAIIALLFDITTLVEFLS 393

  Fly   398 IGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSEMIE 462
            |||||||:||||.||:|||:|             |.:.|:...|:                    
 Worm   394 IGTLLAYSIVSACVIVLRYQP-------------AYNVDEGQFDN-------------------- 425

  Fly   463 EVLAGRLKAQFRCLEPLLG---RFEPG-SV-----VSVAVMLFIFLSFA--------ICVELKVS 510
               .|:|:...    |..|   :.:|| |:     |.:|.|.|..|.|:        :|      
 Worm   426 ---GGKLRFSI----PFCGFLDKLQPGHSIYYGMSVMIASMFFSGLGFSSGYLYGTVLC------ 477

  Fly   511 WTQLYTGTWWALIIYGFIIFAAGTCVAVIAVHNQNTRGLIFKVPLVPFVPALGIFCNILLMVHLD 575
              |::.....||||..|:.         |..|..|...|.|||||||.:|||.:..|.|:||||.
 Worm   478 --QIFLLVNIALIILSFLF---------ICAHYPNNTPLDFKVPLVPLIPALSLLINTLMMVHLA 531

  Fly   576 AVTWVRFFVWVCIGMVVYFLYGIRNSKEGEV--------CSSYSILMTTSEAG 620
            .:||:|..||:.||.|:||.|||.:||| ||        .|:|..:::...||
 Worm   532 WITWLRLVVWMSIGFVIYFGYGIHHSKE-EVQDAEKFSKSSTYESVVSGVVAG 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 285/593 (48%)
AA_permease_C 551..601 CDD:290617 29/49 (59%)
C50D2.2NP_493662.1 2A0303 6..559 CDD:273330 288/609 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161276
Domainoid 1 1.000 463 1.000 Domainoid score I228
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 544 1.000 Inparanoid score I630
Isobase 1 0.950 - 0 Normalized mean entropy S2810
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D290636at33208
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - otm14275
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - LDO PTHR43243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2006
SonicParanoid 1 1.000 - - X81
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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