DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and aat-3

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001300351.1 Gene:aat-3 / 180557 WormBaseID:WBGene00000004 Length:529 Species:Caenorhabditis elegans


Alignment Length:425 Identity:96/425 - (22%)
Similarity:188/425 - (44%) Gaps:50/425 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DVMETPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGI-ILSFILAGFISMLAALCYA 92
            :|.:..|.:.:..|:...:.:|.::|:||::....:..:....|: ::.::|:|..:.:.|.|||
 Worm    58 EVGDKGLEKTMTLFNGVSIIVGCIIGSGIFISPTGIQAQAGSVGLSLIVWVLSGLFAGIGAFCYA 122

  Fly    93 EFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWSGYVDSMLGGWIGNTTLE 157
            |.||.:.|:|..|.|...:.|.|.||:                 |.|   ::|::......|.:.
 Worm   123 ELGTLIRKSGGDYAYIMEAFGPFLAFL-----------------RLW---IESIVVRPCTATIVA 167

  Fly   158 LTGGIH--EPGLAQYPD---------VLAFLVCIVYAAALAGGVKATAVFNSLLTLVNIAVMVLV 211
            ||..|:  :|   .|||         ::|.|:.::..|.....||..:.......:...|.:||:
 Worm   168 LTFAIYMLKP---FYPDCDSPPLSTELIAALLLVLLTAVNCISVKWASKVQDFFFVTKTAALVLI 229

  Fly   212 ISVGFW-YADGKNWSEAEGGF--LPYGVGGVIAGAATCFY----AFVGFDSIATSGEEAKNPSVS 269
            |..|.| ...||  .||...|  :.......:..|:..||    |:.|::.:....||.:||..:
 Worm   230 IFTGLWNMVSGK--PEAFDSFENIFENTAKDLETASLAFYSGLFAYQGWNYLNFIVEELQNPKRN 292

  Fly   270 IPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGALCGMTTT 334
            :|::..||..:.|:.|.|.:.||...|...|:..:.::...|.:.|..|..:.:.|...|....:
 Worm   293 LPLSIAISCSLCTIIYTLTNVALYTSITPDEMLASPAVAVLFAEKNYGWFAFCMPIFVACSTIGS 357

  Fly   335 LLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSAC-LALVFDLAKLVEFMSI 398
            ..|.:....|..|..|.:|.:.:....:|.||:.|:..::::|::|.. |.|..::..|:.::.:
 Worm   358 ANGVILTSSRLFYCGAREGQMPNVLTMVNKTTKTPIPAVILTGLLSLLYLLLSNNIYSLINYIQV 422

  Fly   399 GTLLAYTIVSASVIILRY--RPMERIHTTIRVPAV 431
            ...:|   :..:::.|.|  :.|......::.|.|
 Worm   423 SYWIA---IGGAILALFYFRKTMPDAPRAVKAPIV 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 95/422 (23%)
AA_permease_C 551..601 CDD:290617
aat-3NP_001300351.1 2A0308 40..527 CDD:273332 96/425 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.