DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13248 and B0454.6

DIOPT Version :9

Sequence 1:NP_649219.1 Gene:CG13248 / 40254 FlyBaseID:FBgn0036984 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_494428.1 Gene:B0454.6 / 173650 WormBaseID:WBGene00015197 Length:585 Species:Caenorhabditis elegans


Alignment Length:616 Identity:250/616 - (40%)
Similarity:359/616 - (58%) Gaps:53/616 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ILSGICTKMNRTKSVPTDV-METPLNRCLNTFDIALLGIGHMVGAGIYVLTGTVAKEMAGPGIIL 75
            ::|.:...:.|.|....|. :::.|.|||...||..|.:|.|:|||||||||||.:..|||.||.
 Worm     1 MVSHVWQAITRKKRFEGDSHLDSNLRRCLGLMDITFLALGQMMGAGIYVLTGTVVRNQAGPSIIF 65

  Fly    76 SFILAGFISMLAALCYAEFGTRVPKAGSAYVYTYISMGEFWAFVIGWNILLEHMLGAASVARAWS 140
            ||.|||..::|:|..|||||.|.|:|||||.||||..||.|||::||.|.||:|:|.|:|||:||
 Worm    66 SFALAGIAALLSAFSYAEFGARFPRAGSAYTYTYIGFGELWAFIVGWTIPLEYMIGNAAVARSWS 130

  Fly   141 GYVDSMLGGWIGNTTLELTGGIHEPG--LAQYPDVLAFLVCIVYAAALAGGVKATAVFNSLLTLV 203
            .|.|:||..:|.|||:...|.:.|||  .:.|||:|:||:..:.|..:|.|.|.:|..||...::
 Worm   131 AYFDNMLDNYIKNTTIGALGELSEPGGFFSTYPDILSFLLICLCACVIAVGPKVSANVNSSFVVL 195

  Fly   204 NIAVMVLVISVGFWYADGKNW----SEAEGGFLPYGVGGVIAGAATCFYAFVGFDSIATSGEEAK 264
            ||.|:.:||..|..|||..||    |:....|.|:|:.|.:.||||||::::||:.:||:|||.|
 Worm   196 NIVVIFIVIVSGICYADFNNWTGTTSDGRSMFFPFGLTGTLTGAATCFFSYIGFEVLATAGEEVK 260

  Fly   265 NPSVSIPVATVISLFVVTVGYILVSAALTLMIPISEINPAASLPEAFGQLNLSWAKYLISIGALC 329
            :|..:|||||.:|:.|:...|||||:.||||:|..:::..|...|||.....:...|:||||||.
 Worm   261 SPHRTIPVATFLSIGVIMTLYILVSSTLTLMVPYDQVHTTAPFAEAFSARGCTTVMYIISIGALI 325

  Fly   330 GMTTTLLGSLFALPRCMYAMASDGLLFSCFGKINPTTQVPLLNLVVSGVMSACLALVFDLAKLVE 394
            |:|..|:..:|||||.:||||.|||:|.....:..:|:|||..:|:..:::|.:||:||:..|||
 Worm   326 GLTNNLVTGVFALPRAVYAMADDGLIFKWLAHVTSSTKVPLNAIVIFTLLNAIIALIFDIEALVE 390

  Fly   395 FMSIGTLLAYTIVSASVIILRYRPMERIHTTIRVPAVAGSPDDDDDDDEDVASQSSMDTSSPTSE 459
            |:|||||.||:.||.||::|||:               .:|.|.|.        ..||.....|.
 Worm   391 FLSIGTLFAYSFVSGSVLVLRYQ---------------SAPIDGDG--------KRMDNGGELSS 432

  Fly   460 MIEEVLAGRLKAQFRCLEPLLGRFE---PGSVVSVAVMLFIFLSFAICVELKVSWTQLYTGTWWA 521
            .|                |....:|   .|:.:|:.|...|...|.:....:..:.:    .|:.
 Worm   433 WI----------------PARNFWESLPAGTSISLGVAALIGSFFWLAFTFRTGFYE----HWYG 477

  Fly   522 LIIYGFIIFAAGTCVAVIAVHNQNTRGLIFKVPLVPFVPALGIFCNILLMVHLDAVTWVRFFVWV 586
            .|..||........:|.|..|.||:....||||.|||:|.|.:..|:.:|.:|...||:|.|||:
 Worm   478 QISIGFNGLLIVLVMAFILGHQQNSLETSFKVPFVPFLPCLSLLVNVFMMAYLTTATWIRLFVWM 542

  Fly   587 CIGMVVYFLYGIRNSKEGEVCSSYSILMTTS 617
            .:|:::||.||||:|||.:..::.:.:..:|
 Worm   543 GVGLLIYFSYGIRHSKEAKKLTTIADIRMSS 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13248NP_649219.1 2A0303 32..603 CDD:273330 243/579 (42%)
AA_permease_C 551..601 CDD:290617 25/49 (51%)
B0454.6NP_494428.1 2A0303 7..559 CDD:273330 246/594 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I5742
eggNOG 1 0.900 - - E2759_KOG1286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 544 1.000 Inparanoid score I630
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D290636at33208
OrthoFinder 1 1.000 - - FOG0000131
OrthoInspector 1 1.000 - - otm14275
orthoMCL 1 0.900 - - OOG6_100168
Panther 1 1.100 - - O PTHR43243
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X81
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

Return to query results.
Submit another query.