DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33969 and fbxw4

DIOPT Version :9

Sequence 1:NP_001034034.1 Gene:CG33969 / 40252 FlyBaseID:FBgn0053969 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571596.1 Gene:fbxw4 / 58035 ZFINID:ZDB-GENE-000516-1 Length:392 Species:Danio rerio


Alignment Length:429 Identity:95/429 - (22%)
Similarity:169/429 - (39%) Gaps:88/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MSLKDLTIECLLLIFDYCSEGDLLCLCRADP----ALEYIIEAYYFYPLAYDLLLCGHRNNPRIE 66
            |.:..|..:.|.|:..|.   |...|||...    :.::|.....:..:|.|::..| .....|:
Zfish     1 MFVFQLPEDVLFLVLSYL---DPKSLCRFSQTCRRSYQFISRDAVWRRIAKDMINTG-LTRQGID 61

  Fly    67 QRNRRRLKNYERIELSRNWVSGTYFER----------PYFHHAQMFPTKLCLEADFLYITHACYL 121
            ..:...||  :|:.:|.||..|...:.          |:..          |:.|.||::.|..:
Zfish    62 LCHSVPLK--DRVRVSHNWTHGVCRKEILLKWKINLLPWIQ----------LDCDVLYLSQAANI 114

  Fly   122 RKYR--------RSSCDALHRRFDEEICTSAQTDISDFVKKNETIFAGRVCGSCFHYDTDSMVMT 178
            ..|.        ::|..||.....|::|....||       ...|.||          .|..::.
Zfish   115 SAYHLRADGGKLQNSRVALFSGHQEDVCRFTLTD-------THLISAG----------GDGKIIV 162

  Fly   179 EQR-------MHPANEYLYCVDFVKDLYAT-STDHCCRLWQRAQEFGMTHFDQVMH-LPHAFR-- 232
            ..|       .:..|:.:.|:|....:..: |.|...::|....:    .|.|.:| :|...|  
Zfish   163 HDRGSDYSVVFYGHNQEVNCIDCKGAVIVSGSRDKSAKIWALTPD----RFGQCLHTIPTYDRVW 223

  Fly   233 SLELS-SDGQWLYGGLYTDNGRQALR-----AVHVES--GEELVFSSKTMSIYDLKLKDDQVIFT 289
            |:.:| |.|.::.|....:| ...||     ..|:.|  |.|.   .:...:.|:..:....:.|
Zfish   224 SVAISPSLGTFVTGTACCEN-FAPLRIWDTERCHLVSCLGTEF---RRGAGVLDIIYESPFQLLT 284

  Fly   290 ANFDSTFRMFDRRV--DRDVAIWDDPFDSSFYSLEYDGLHAVLVGTNRHARVNLYDIRMKKYVQL 352
            ..:|:..|.:|.||  .:.|..|::|.||:.|.::.|..|.:..|::.:..|.|:|.|..:.:|:
Zfish   285 CGYDTFIRYWDLRVCSRKCVMEWEEPHDSALYCIKTDRNHMIASGSSYYGVVRLWDKRQTRCLQM 349

  Fly   353 YFPGRTRSHNGLSPVYSLACDSQYMFVATDHNMRVFDFK 391
            :....|.|    ||||||..::.:::.|....:...||:
Zfish   350 FQLAPTTS----SPVYSLCFNTTHLYAALASVLYSLDFR 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33969NP_001034034.1 WD40 <146..345 CDD:225201 49/219 (22%)
WD40 183..391 CDD:295369 54/221 (24%)
fbxw4NP_571596.1 F-box-like 5..46 CDD:289689 9/43 (21%)
WD40 repeat 94..136 CDD:293791 10/51 (20%)
WD40 125..>376 CDD:225201 65/279 (23%)
WD40 134..368 CDD:295369 61/262 (23%)
WD40 repeat 181..217 CDD:293791 8/39 (21%)
WD40 repeat 222..262 CDD:293791 10/40 (25%)
WD40 repeat 270..308 CDD:293791 8/37 (22%)
WD40 repeat 315..351 CDD:293791 9/35 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587066
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28NFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49778
OrthoDB 1 1.010 - - D320419at33208
OrthoFinder 1 1.000 - - FOG0008136
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108554
Panther 1 1.100 - - LDO PTHR14381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.720

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