DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33969 and Fbxw4

DIOPT Version :9

Sequence 1:NP_001034034.1 Gene:CG33969 / 40252 FlyBaseID:FBgn0053969 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_006527194.1 Gene:Fbxw4 / 30838 MGIID:1354698 Length:547 Species:Mus musculus


Alignment Length:340 Identity:79/340 - (23%)
Similarity:140/340 - (41%) Gaps:51/340 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ERIELSRNWVSGTYFERPY--FHHAQMFPTKLCLEADFLYITHACYLRKYR-RSSCDALHRR--- 135
            ||::||:||..|...:|..  :.::|| |.....:|. ||::.|.::..|: |....:|:||   
Mouse   232 ERVKLSQNWRLGRCRDRILLKWRYSQM-PWMQLQDAS-LYLSQANFILAYQFRPDGASLNRRPFR 294

  Fly   136 ----FDEEICTSAQTDISDFVKKNETIFAGRVCGSCFHYDTDSMVMTEQRMHPANEYLYCVDFVK 196
                .||::|        .||..|..|.:....|....:...|....:...|  .:.:.|||...
Mouse   295 VFSGHDEDVC--------HFVLANSHIVSAGGDGKIGVHKIHSTFTVKYSAH--EQEVNCVDCKG 349

  Fly   197 DLYAT-STDHCCR--------LWQRAQEFGMTHFDQVMHLPHAFRSLELSSDGQWLYGGLYTDNG 252
            .:..: |.|...:        ||.......:....|....|.|..|:...|.|:|.:        
Mouse   350 GIIVSGSRDRTAKLFCDWNSLLWALLTSENLGPQQQGEPGPGALPSVLRDSSGRWSH-------- 406

  Fly   253 RQALRAVHVESGEELVFSSKTM----SIYDLKLKDDQVIFTANFDSTFRMFDRRVD--RDVAIWD 311
               |....:.||:.:.......    .:.|:..:....:.:..:|:..|.:|.|..  :.|..|:
Mouse   407 ---LACFFLPSGQLITHLGSDFPPGAGVLDVMYESPSTLLSCGYDTYVRYWDLRTSTRKCVMEWE 468

  Fly   312 DPFDSSFYSLEYDGLHAVLVGTNRHARVNLYDIRMKKYVQLYFPGRTRSHNGLSPVYSLACDSQY 376
            :|.||:||.|:.||.|.:..|::.:..|.|:|.|.:..:..:....|...   ||||.|...:::
Mouse   469 EPHDSTFYCLQTDGNHLLATGSSYYGLVRLWDRRQRACLHAFSLTSTPLS---SPVYCLRFTTRH 530

  Fly   377 MFVATDHNMRVFDFK 391
            ::.|..:|:.|.||:
Mouse   531 LYAALSYNLHVLDFQ 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33969NP_001034034.1 WD40 <146..345 CDD:225201 44/213 (21%)
WD40 183..391 CDD:295369 49/222 (22%)
Fbxw4XP_006527194.1 F-box-like 165..206 CDD:372399
WD40 294..534 CDD:392136 54/263 (21%)
WD40 repeat 303..335 CDD:293791 7/39 (18%)
WD40 repeat 343..424 CDD:293791 17/91 (19%)
WD40 repeat 431..468 CDD:293791 6/36 (17%)
WD40 repeat 476..515 CDD:293791 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842644
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28NFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 70 1.000 Inparanoid score I5308
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49778
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008136
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108554
Panther 1 1.100 - - LDO PTHR14381
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.760

Return to query results.
Submit another query.