Protein Alignment CG5498 and VPS20

DIOPT Version :10

• Sequence 1: NP_730525.2
• Gene: CG5498 / 40250
• FlyBaseID: FBgn0027565
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_013794.1
• Gene: VPS20 / 855101
• SGDID: S000004682
• Length: 221
• Species: Saccharomyces cerevisiae
• Alignment Length: 221
• Identity: 52/221 - (23%)
• Similarity: 110/221 - (49%)
• Gaps: 29/221 - (13%)

  Fly   237 LNISQEDQAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVRQYMKEN----KRQMAKTYLRKR---- 293
            ::|::.|:|:..::.::.::.|.....:..|.|...:::..:::|    |..|...:|.||
Yeast     8 VHITKTDRAILEVKRSKDEIHKFTRRTDNLILVEKSQLKDLIRKNPENYKSNMKVRFLLKRIHYQ 72

  Fly   294 -HLLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLAD 357
             |||::..::    |.|:|:::|:::........::..|.|:..|||:    ..::.||||::.|
Yeast    73 EHLLQQASDQ----LINLENMVSTLEFKMVEKQFINGLKNGNEILKKL----NKEFSNVDELMDD 129

  Fly   358 VRDTLDQHREVQDIMSNSVVENASQEDDQLEQELRELAGESAPATFSPHINNNLRAEVVITDEEM 422
            |:|.:....|:.:.:|.|:|..::.||| |::||..|..|     .:|...||.:...:.:.|.:
Yeast   130 VQDQIAYQNEINETLSRSLVGTSNYEDD-LDKELDALESE-----LNPEKMNNAKVANMPSTEGL 188

  Fly   423 IAMLQDLEVED------GTVSQSSVK 442
            .::.|..:.|.      .|..:|..|
Yeast   189 PSLPQGEQTEQKEREEFATEERSDTK 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5498	NP_730525.2	Snf7	244..397	CDD:460896	40/161 (25%)
VPS20	NP_013794.1	Snf7	15..186	CDD:460896	44/184 (24%)