DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5498 and CHM7

DIOPT Version :9

Sequence 1:NP_730525.2 Gene:CG5498 / 40250 FlyBaseID:FBgn0027565 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_012486.3 Gene:CHM7 / 853398 SGDID:S000003585 Length:450 Species:Saccharomyces cerevisiae


Alignment Length:470 Identity:90/470 - (19%)
Similarity:180/470 - (38%) Gaps:101/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RMQVQFAMFRS-RHLDAEGYDAKMNFWMD-LIAKYLKFSGRPIFSL--RDLQLLFMRGDQLPACL 86
            |:...:..||. :.|:.:||:|.::.|.| .:.:|:..|.|.||::  |.||.|......:|..:
Yeast     9 RLPSLYRDFRPLKDLNPDGYEANISTWRDFFLQQYISNSNRIIFTIGTRTLQELTHEVYGVPKSI 73

  Fly    87 DTVISEMQQRKQIRSRSEFEYDPANSWGGWLVNSLVKRPLSWSWSK------------------- 132
            |..|..:.....:.....|     |..|.:..||   |...|.|.:                   
Yeast    74 DIAIDVLVNEGNLIPMELF-----NLGGMYTDNS---RKGFWKWVRSWKESTNMYKSRKDETNFY 130

  Fly   133 ----------------------IKHSVVTEDLEASALI----EWIHLDALNNTCDLIAEKVLSEN 171
                                  :|.||..|....:.|:    |::..::|.:......|    |.
Yeast   131 LREDKFIIKANLEKEYQRFHELLKRSVFMEASSITDLVFTRNEFVTTESLQSFFSTYDE----ET 191

  Fly   172 TGKLLHFNALKTLCKTHGVPTYS----DKDLCACLLALNVRQILGLEFKVEKGIRQIHLIKIPKK 232
            ....|||           :..|.    .||....::|..|..|..   :..|||.:         
Yeast   192 KNVFLHF-----------IENYKHIIVSKDNVIKVIAAEVEDITS---RFSKGITE--------- 233

  Fly   233 PGDDLNISQEDQAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVR-QYMKENKRQMAKTYLRKRHLL 296
              :||.|:.....:.|:.       ||:..|.:||..::.|:| ....|..:::...|.:.|.|.
Yeast   234 --NDLRIASVKVGIININ-------KQITRLRKEINESNIKLRGPEFNELPKRIRIEYKQARLLS 289

  Fly   297 EKNHERRSLALHNIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLADVRDT 361
            ||:..|.....:|:..:.:.:|.:..:.|::......:..:|.:....| ..:.|:::|.::::.
Yeast   290 EKHLSRLLKFQNNLAQVRTQIDTSATNAVLIQTLSESNEVIKSINGYIG-STEKVEDLLDEIKEG 353

  Fly   362 LDQHREVQDIMSNSVVENASQEDDQLEQELRELAGESAPATFSPHINNNLRAEVVITDEEMIAML 426
            .|:..||.|::::.......:.::::|:||.:|..:........:.|.:|......:.|:::..|
Yeast   354 HDRTEEVNDLLAHYNKGQDEEAEEEIERELEQLELDEKNNNKEENKNQDLHEPKESSSEDLLKRL 418

  Fly   427 QDLEV--EDGTVSQS 439
            .:|::  .:|.|..:
Yeast   419 NNLKINTNEGPVQDN 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5498NP_730525.2 Snf7 244..397 CDD:304451 30/153 (20%)
CHM7NP_012486.3 Snf7 247..381 CDD:419749 26/141 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56027
OrthoFinder 1 1.000 - - FOG0004474
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3927
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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