DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5498 and AT3G62080

DIOPT Version :10

Sequence 1:NP_730525.2 Gene:CG5498 / 40250 FlyBaseID:FBgn0027565 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001078328.1 Gene:AT3G62080 / 825381 AraportID:AT3G62080 Length:462 Species:Arabidopsis thaliana


Alignment Length:454 Identity:91/454 - (20%)
Similarity:191/454 - (42%) Gaps:104/454 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WQDNGRMQVQFAMFRSRHLDAEGYDAKMNFWMDLIAKYLKFSGRPIFSLRDLQL---LFMRGDQL 82
            |.|......:|..|..:..|   ::.|..||.|||.|..:..|  :|.:..:|:   .|.||...
plant    56 WDDEVVAMARFKAFSGQRSD---WELKFQFWRDLIIKVSRQFG--LFIIDPVQVKKAWFDRGGMT 115

  Fly    83 PACLDTVISEMQQRKQIRSRSEFEYDPANSWGGWLVNSLVKRPLSWSWSKIKHSVVTEDLEASAL 147
            |.|:|.|:..|.....:...|:.: ||    |...:..|::        .:|:.:|.:.::...:
plant   116 PLCIDDVVLLMHSEGDVVRISDLD-DP----GSGRIARLLR--------TVKNLMVQQPVKQEEI 167

  Fly   148 IEWIHLDALNNTCDLI---------AEKVLSENTGKLLHFNA--------LKTLCKTHGVPTYSD 195
            :|        ||..|:         ..|:|||.     |:.:        .:.||......:...
plant   168 LE--------NTLVLVPLLKEKAADVVKILSEG-----HWTSTCVVTLKKFRNLCNGSNEASAVL 219

  Fly   196 KDLCAC----LLALNVRQILGLEFKVEKGIR----QIHLIKIPKKPGDDLNISQEDQAVHNLQNT 252
            ..|..|    .:::|..:::       :|::    |..|      ||    ||..|..:.:|..|
plant   220 SHLSGCGKAHKISINRGELI-------EGVKVSFSQTAL------PG----ISTLDCDILHLLRT 267

  Fly   253 QAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHERRSLALHNIESLLSSV 317
            ..:|..|||.:::..:.:.......:|...|::|..:.|:..::.::.|:.:..|:.:|.:|:::
plant   268 TEKLQDQLEVMDQRCEKSKKSALASLKSGHRKVALRHARELKVVTESREKCTSLLNRVEEVLNTI 332

  Fly   318 DEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLADVRDTLDQHREVQDIMSNSVVENASQ 382
            .:::::.:|.:|.|.|:..:|.:    .:..|:|.:.|.::.:|::..::|:..:.::...:...
plant   333 ADSESTKMVSEAIKTGARVMKDI----KISADDVHDYLEELEETIESQKQVEKALESAPYPDIDD 393

  Fly   383 EDDQLEQELREL-------AGESAPATFSPHINNNLRAEVVITDEEMIAMLQDLEVEDGTVSQS 439
            ||  :|:||.||       :.:..|||..             |.:.:..|..:|::  |...|:
plant   394 ED--IEEELLELEMDLESESSQVLPATSD-------------TADSLTEMFSELKL--GKTKQT 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5498NP_730525.2 Snf7 244..397 CDD:460896 31/159 (19%)
AT3G62080NP_001078328.1 Snf7 261..395 CDD:460896 24/137 (18%)

Return to query results.
Submit another query.