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Protein Alignment CG5498 and Chmp4bl1
DIOPT Version :9
Sequence 1: | NP_730525.2 |
Gene: | CG5498 / 40250 |
FlyBaseID: | FBgn0027565 |
Length: | 448 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001263385.1 |
Gene: | Chmp4bl1 / 679886 |
RGDID: | 1583604 |
Length: | 224 |
Species: | Rattus norvegicus |
Alignment Length: | 180 |
Identity: | 46/180 - (25%) |
Similarity: | 78/180 - (43%) |
Gaps: | 36/180 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 244 QAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHERRSLALH 308
:|:..|::|:..|.|:.|.||::|:......:::..:|||...:...|| |.:|:: |.
Rat 24 EAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKRAALQALKRK-----KRYEKQ---LA 80
Fly 309 NIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSG------------LKYDNVDEVLADVRDT 361
.|:..||:: |.|...:. .:||..:||.|.| :..|.|||::.|:.|.
Rat 81 QIDGTLSTI-EFQREALE------NANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQ 138
Fly 362 LDQHREVQDIMSNSVVENASQEDDQLEQELRELAGE---------SAPAT 402
.:...:....:|..|......:.|:|..||.||..| |.|.|
Rat 139 QELAEQTSTAISKPVGFGEEFDKDELMAELEELEQEELDKNLLEISGPET 188
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5498 | NP_730525.2 |
Snf7 |
244..397 |
CDD:304451 |
42/164 (26%) |
Chmp4bl1 | NP_001263385.1 |
Snf7 |
24..198 |
CDD:281366 |
46/180 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR22761 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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