DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5498 and chmp7

DIOPT Version :9

Sequence 1:NP_730525.2 Gene:CG5498 / 40250 FlyBaseID:FBgn0027565 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_012814408.1 Gene:chmp7 / 548452 XenbaseID:XB-GENE-5867894 Length:493 Species:Xenopus tropicalis


Alignment Length:468 Identity:121/468 - (25%)
Similarity:204/468 - (43%) Gaps:88/468 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FPASWQDNGRMQVQFAMFR-SRHLDAEGYDAKMNFWMDLIAKYLKFSGRPIFSLRDLQLLFMRGD 80
            :|..|.|:.||...|:.|: :|.::...:|.||.||:.||.|:.:..|....||..|:..|.|..
 Frog    32 YPPEWDDDERMSFLFSAFKQTRDVNTSDWDGKMKFWIPLILKHARAQGLLSISLSQLERDFRRKG 96

  Fly    81 QLPACLDTVISEMQQRKQIRSRSEFEYDPANSWGGWLVNSLVKRPLSWSWSKIKHS--------V 137
            ..|..|..||.||.::..:|..|::..:.::.|..|.:..||.|||.|:...:..|        |
 Frog    97 FAPLGLRIVIQEMMRQGTLRKESDYVSNVSSGWLSWGMRQLVIRPLRWTIGTVLGSQMGPDEPLV 161

  Fly   138 VTEDL-EASALIEWIHLDALNNTCDLIAEKVLSENTGKLLHFNALKTLCKTHGVPTYSDKDLCAC 201
            :.|.: |.:||:    |....:: .|.|..:|||        ..::|||          .::|..
 Frog   162 IPEIIKERAALV----LQRYQSS-PLRALPLLSE--------EEVRTLC----------AEICPN 203

  Fly   202 LLALNV--------RQILGLEFKVEKGIRQIHLIKIPKKPGDDLNISQEDQAVHNLQNTQAQLLK 258
            ..|||:        ::|..||   ..|.:.:..:::.....|.  ||:.|..::.||.::..|.:
 Frog   204 PSALNLVLLQLQGDKKICVLE---RAGKKLVKFVRVSVGQVDP--ISESDLGIYELQQSEKLLSE 263

  Fly   259 QLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHERRSLALHN----IESLLSSVDE 319
            :|:...||.....::.|.|.:...:..|...||||.||    |||...|.|    ::.:|..:..
 Frog   264 RLQSAGEESDRLTEEARTYNRAGNKHQALRCLRKRKLL----ERRITELQNKQDTVQGILERIAA 324

  Fly   320 AQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLADVRDTLDQHREVQDIMSNSV--VENASQ 382
            |:....|:.||::|.:.||..|.      |...|....:.|.:.::.::||.:|.::  |.:|..
 Frog   325 AETDRKVVSAYQMGVSALKLALK------DVTMEKAESIVDQIQEYCDLQDDLSQTLASVSDADI 383

  Fly   383 EDDQLEQELRELAGE-----------SAPATFSPH-----------INNNLRAEV--VITDEEMI 423
            :.:.||:||.::...           |.|...||.           .:.:|..|:  ::..||||
 Frog   384 DSEDLEKELNDILQNKEMIVDLPDVPSGPVVISPQRPTEWETDQDIDSEDLEKELNDILQKEEMI 448

  Fly   424 AMLQDLEVEDGTV 436
            ..|.|  |..|.|
 Frog   449 VDLPD--VPSGPV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5498NP_730525.2 Snf7 244..397 CDD:304451 41/158 (26%)
chmp7XP_012814408.1 Snf7 251..412 CDD:304451 42/170 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I8978
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14613
Inparanoid 1 1.050 118 1.000 Inparanoid score I4638
OMA 1 1.010 - - QHG56027
OrthoDB 1 1.010 - - D551620at33208
OrthoFinder 1 1.000 - - FOG0004474
OrthoInspector 1 1.000 - - otm48369
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3927
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.010

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