Protein Alignment CG5498 and shrb

DIOPT Version :10

• Sequence 1: NP_730525.2
• Gene: CG5498 / 40250
• FlyBaseID: FBgn0027565
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_610462.3
• Gene: shrb / 35933
• FlyBaseID: FBgn0086656
• Length: 226
• Species: Drosophila melanogaster
• Alignment Length: 155
• Identity: 48/155 - (30%)
• Similarity: 83/155 - (53%)
• Gaps: 3/155 - (1%)

  Fly   244 QAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHERRSLALH 308
            :|:..|:.|:..|:|:.|.||.:|:...:..|:...:||| :|...|:|:..|||..::....|.
  Fly    20 EAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR-VALQALKKKKRLEKQLQQIDGTLS 83

  Fly   309 NIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLADVRDTLDQHREVQDIMS 373
            .||....:::.|..:..||...|..::.||:...|  :..|.|.:::.|:.:..|..||:.|.:|
  Fly    84 TIEMQREALESANTNTAVLTTMKNAADALKRAHQN--MDVDKVHDMMDDIAEQQDVAREISDAIS 146

  Fly   374 NSVVENASQEDDQLEQELRELAGES 398
            |.|...|..:|:.||:||.||..|:
  Fly   147 NPVAFGADLDDEDLERELDELEQEN 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5498	NP_730525.2	Snf7	244..397	CDD:460896	47/152 (31%)
shrb	NP_610462.3	Snf7	20..193	CDD:460896	48/155 (31%)