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Protein Alignment CG5498 and CHMP4A

DIOPT Version :10

Sequence 1:	NP_730525.2	Gene:	CG5498 / 40250	FlyBaseID:	FBgn0027565	Length:	448	Species:	Drosophila melanogaster
Sequence 2:	NP_054888.3	Gene:	CHMP4A / 29082	HGNCID:	20274	Length:	222	Species:	Homo sapiens

Alignment Length:	207	Identity:	48/207 - (23%)
Similarity:	94/207 - (45%)	Gaps:	28/207 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   243 DQAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHERRSLAL 307
            ::|:..|:.|:..|:|:.|.||::|:......::|..:||| .|...||::...|:...:....|
Human    20 EEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR-AALQALRRKKRFEQQLAQTDGTL 83

  Fly   308 HNIESLLSSVDEAQNSGVVLDAYKIGSNTLKKVLSNSGLKYDNVDEVLADVRDTLDQHREVQDIM 372
            ..:|....:::.|..:..||...::.:.::||...:  :..|.|||::.|:.:..:..:::.|.:
Human    84 STLEFQREAIENATTNAEVLRTMELAAQSMKKAYQD--MDIDKVDELMTDITEQQEVAQQISDAI 146

  Fly   373 SNSVVENASQEDDQLEQELRELAGE---------------------SAPATFSPHINNNLRAEVV 416
            |..:......::|:|.:||.||..|                     |.|:|..|    ...|..|
Human   147 SRPMGFGDDVDEDELLEELEELEQEELAQELLNVGDKEEEPSVKLPSVPSTHLP----AGPAPKV 207

  Fly   417 ITDEEMIAMLQD 428
            ..|||.:..|.:
Human   208 DEDEEALKQLAE 219

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.