DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and RHO2

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_014309.3 Gene:RHO2 / 855634 SGDID:S000005034 Length:192 Species:Saccharomyces cerevisiae


Alignment Length:207 Identity:68/207 - (32%)
Similarity:111/207 - (53%) Gaps:37/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWA--IDQYRIYKDVLERSWEVVDGVNV 77
            |.|::||.|.|||.|:..      .:|.:....:.|||:.  :...|            |||:.|
Yeast     9 KLVIIGDGACGKTSLLYV------FTLGKFPEQYHPTVFENYVTDCR------------VDGIKV 55

  Fly    78 SLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCK 140
            ||.||||.|  ::::.|.|:|.::|::|:.|::.:..||.|.:..|..|..|:|||.|::|||.|
Yeast    56 SLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLK 120

  Fly   141 NDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYETSVFTYFGVNEVFE 204
            .|||..       ::|.|..|       .::|..::|:.||:.:|. .|.|.|..|..||::|||
Yeast   121 KDLRQE-------AHFKENAT-------DEMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVFE 171

  Fly   205 NAIRSALIARRQ 216
            .|.|::|:.:::
Yeast   172 VATRTSLLMKKE 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 67/199 (34%)
RHO 16..211 CDD:197554 66/199 (33%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RHO2NP_014309.3 Rho2 7..191 CDD:206702 68/207 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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