DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and RHO5

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_014219.1 Gene:RHO5 / 855541 SGDID:S000005124 Length:331 Species:Saccharomyces cerevisiae


Alignment Length:234 Identity:67/234 - (28%)
Similarity:100/234 - (42%) Gaps:55/234 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQY----RIYKDVLERSWEVVDG 74
            :|||::||.|||||.|:.:...|      ...:.:||||:  |.|    .|.........|:.:|
Yeast     4 IKCVIIGDGAVGKTSLLISYTTN------SFPTDYVPTVF--DNYSTTIAIPNGTASSPLELDNG 60

  Fly    75 VN------------------VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKM 119
            .:                  ..:.||||.|  |:|:.|...|.::|:.|:|||::...|..|...
Yeast    61 NDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTE 125

  Fly   120 MWYPEIRRF-----------CPDVPVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVM 173
            .|.||:::.           ....|::|||.|:|||.....:..|.           ...||.|.
Yeast   126 KWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQ-----------EANSDYVS 179

  Fly   174 PDEARAVAKELG-VAYYETSVFTYFGVNEVFENAIRSAL 211
            .:|...:.:..| :.|.|.|..|..||.||||.|:|.|:
Yeast   180 QEEIDELVQRCGFMGYTECSAATQAGVREVFEQAVRYAI 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 66/231 (29%)
RHO 16..211 CDD:197554 65/230 (28%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RHO5NP_014219.1 RHO 6..220 CDD:197554 66/232 (28%)
PBP1 <161..>316 CDD:227507 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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