DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoBTB and Rhoq

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_038934034.1 Gene:Rhoq / 85428 RGDID:621626 Length:355 Species:Rattus norvegicus


Alignment Length:159 Identity:49/159 - (30%)
Similarity:77/159 - (48%) Gaps:23/159 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFG--DHDKDRRFA 95
            |||....:.......:||||:  |.|.:.        ..|.|......|:||.|  |:|:.|..:
  Rat   212 RACFMSYANDAFPEEYVPTVF--DHYAVS--------VTVGGKQYLFGLYDTAGQEDYDRLRPLS 266

  Fly    96 YGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKNDLRYMYRDENYLSYFGEKG 160
            |..:||.|:|||:.:|.|.:|.|..|.||::.:.|:||.:|:|.:.|||   .|...|:...:  
  Rat   267 YPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR---DDPKTLARLND-- 326

  Fly   161 TFVRAALKSDLVMPDEARAVAKELGVAYY 189
                  :|...|..::.:.:|||:|...|
  Rat   327 ------MKEKPVCVEQGQKLAKEIGACCY 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 49/159 (31%)
RHO 16..211 CDD:197554 49/159 (31%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RhoqXP_038934034.1 P-loop_NTPase 210..350 CDD:422963 49/159 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.