DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and RAC10

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_201093.1 Gene:RAC10 / 836408 AraportID:AT5G62880 Length:215 Species:Arabidopsis thaliana


Alignment Length:223 Identity:73/223 - (32%)
Similarity:112/223 - (50%) Gaps:37/223 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||.|||.|||||.::.....||      ..:.::|||:  |.:        .:..||:|..
plant     7 KFIKCVTVGDGAVGKTCMLICYTSNK------FPTDYIPTVF--DNF--------SANVVVEGTT 55

  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139
            |:|.||||.|  |:::.|..:|..:||.:|.||:.|..|..|....|.||::.|.|.||::|||.
plant    56 VNLGLWDTAGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGT 120

  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYY-ETSVFTYFGVNEVF 203
            |.|||   .|::||:..........|          :...:.|.:|..|| |.|..|...|..||
plant   121 KLDLR---EDKHYLADHPGLSPVTTA----------QGEELRKLIGATYYIECSSKTQQNVKAVF 172

  Fly   204 ENAIRSAL--IARRQQRFWMTNLKKVQK 229
            ::||:..:  :.:::::   |..||.||
plant   173 DSAIKEVIKPLVKQKEK---TKKKKKQK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 68/200 (34%)
RHO 16..211 CDD:197554 67/197 (34%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RAC10NP_201093.1 Rop_like 8..180 CDD:206705 68/200 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24072
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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