DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhoj

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_075764.1 Gene:Rhoj / 80837 MGIID:1931551 Length:214 Species:Mus musculus


Alignment Length:222 Identity:69/222 - (31%)
Similarity:106/222 - (47%) Gaps:48/222 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HQE--LVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVV 72
            |:|  ::|||:|||.|||||.|:.:.|.:      .....:||||:  |.|.:        ...|
Mouse    16 HEENRILKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAV--------TVTV 64

  Fly    73 DGVNVSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVI 135
            .|....|.|:||.|  |:::.|..:|..:||.|:|||:.:|.|..|.:..|.||::...|.||.:
Mouse    65 GGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYV 129

  Fly   136 LVGCKNDL--------RYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYET 191
            |:|.:.||        |.:|..|..|:|  |.|.                 .:||.:|. .|.|.
Mouse   130 LIGTQIDLRDDPKTLARLLYMKEKPLTY--EHGV-----------------KLAKAIGAQCYLEC 175

  Fly   192 SVFTYFGVNEVFENAIRSALIARRQQR 218
            |..|..|:..||:.||.:....:::::
Mouse   176 SALTQKGLKAVFDEAILTIFHPKKKKK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 68/210 (32%)
RHO 16..211 CDD:197554 66/205 (32%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RhojNP_075764.1 P-loop_NTPase 22..195 CDD:304359 67/207 (32%)
RHO 24..197 CDD:197554 66/207 (32%)
Effector region. /evidence=ECO:0000255 50..58 5/9 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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