DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhobtb3

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_082769.1 Gene:Rhobtb3 / 73296 MGIID:1920546 Length:611 Species:Mus musculus


Alignment Length:636 Identity:145/636 - (22%)
Similarity:239/636 - (37%) Gaps:150/636 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LWDTFGDHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVIL--VG----- 138
            :||.|.......|...|.:|::::.:::....|....|..:.|.|:|....||||:  ||     
Mouse    75 VWDIFDSDWYTSRNLIGGADIIVIKYNVNDKFSFHEVKDNYIPVIKRASNSVPVIIAAVGTRQNE 139

  Fly   139 --------CKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFT 195
                    |.:|                         :...|...|...:|||||..|.|.....
Mouse   140 ELPCTCPLCTSD-------------------------RGSCVTTTEGIQLAKELGATYLELHSLD 179

  Fly   196 YFGVNEVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPF---RPPKPPPPE----VTVMVGNY 253
            .|.:.:.|...:...:|....|:    ..:|::|..:.:.|   |||:...||    :.....:|
Mouse   180 DFYIGKYFGGVLEYFMIQALNQK----TSEKMKKRKMTSSFHGIRPPQLEQPEKMPVLKAEASHY 240

  Fly   254 RQDIYNMFLSQAYTDLVLVGAGGTKFA-VHRFMLAAASSIFQRLLSTELTDMGGRSSSESSMVSS 317
            ..|:.|:.|.....|:|......|... .|:.:|.:.|.:|..|                     
Mouse   241 HSDLNNLLLCCQCVDVVFYHPEVTGVVEAHKIVLCSVSHVFMLL--------------------- 284

  Fly   318 TFGEATIADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIRL 382
             |...:.||..|  .::||                           .:.||:......||.....
Mouse   285 -FNVKSPADIQD--SSIIR---------------------------TTQDLFAINRDAVLPGASQ 319

  Fly   383 VHVENHRGVNGLQTIVTLSKLISPQALHQCLRFIYTGTIDKDCDNIEE-----IREAADLLELPQ 442
            ....|    ..|..||..:...|  .|...|||||:|..  ..:.:||     ::::.|      
Mouse   320 EAPSN----PPLPVIVKDALFCS--CLSDILRFIYSGAF--QWEELEEDVRRKLKDSGD------ 370

  Fly   443 LTQLLSRPQTVMENSSDEPNPHICLRIKESME------------RHCIGDGCFSDVTFELDDGLM 495
            ::.::.:.:.:::.    |....|||..::.:            :..:.....:||.||:....:
Mouse   371 VSDIIEKVKCILKT----PGKINCLRNCKTYQARKPLWFYNTSLKFFLNKPMLADVVFEIQGATV 431

  Fly   496 KAHRAVLVGRCDVMRAMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQIPPISAVKCLNLLE 560
            .||||:||.||:||.||..|::.||.|.:|...||:..||...|.|||||...|....:.:.||.
Mouse   432 PAHRAILVARCEVMAAMFNGNYMEAKSVLIPVYGVSKETFLSFLEYLYTDSCCPAGIFQAMCLLI 496

  Fly   561 LANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKLLEPVKLHNAHQLAEWCMSYLCVNYN 625
            .|....:.||.::.|..:|..|..:...|........:.||:..|.|::..|:.|.:.::..||.
Mouse   497 CAEMYQVSRLQHICELFIITQLQSMPSRELASMNLDIVDLLKKAKFHHSDCLSTWLLHFIATNYL 561

  Fly   626 LICKFSLK-GLKALHQDNQEYLREHRWPPVWYLKDYDYYQ--------RCL 667
            :   ||.| ..:.|..:.:.::.:||||...|||....|:        |||
Mouse   562 I---FSQKPEFQDLSVEERSFVEKHRWPSNMYLKQLAEYRKYIHSRKCRCL 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 30/143 (21%)
RHO 16..211 CDD:197554 30/144 (21%)
BTB <392..446 CDD:295341 14/58 (24%)
BTB 481..575 CDD:279045 37/93 (40%)
BTB 485..582 CDD:197585 39/96 (41%)
Rhobtb3NP_082769.1 Rho-like 1..175 27/124 (22%)
P-loop_NTPase 34..174 CDD:304359 27/123 (22%)
BTB 413..515 CDD:279045 38/101 (38%)
Interaction with Rab9. /evidence=ECO:0000250 420..611 64/193 (33%)
BTB 421..518 CDD:197585 39/96 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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