DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhof

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001385887.1 Gene:Rhof / 690130 RGDID:1584038 Length:211 Species:Rattus norvegicus


Alignment Length:221 Identity:65/221 - (29%)
Similarity:102/221 - (46%) Gaps:44/221 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLI---CARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGV 75
            :|.|:|||...|||.|:   |..:..:|         :.|:|:  ::|        .:...|...
  Rat    20 LKIVIVGDGGCGKTSLLMVYCQGSFPEH---------YAPSVF--EKY--------TASVTVGNK 65

  Fly    76 NVSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVG 138
            .|:|.|:||.|  |:|:.|..:|..:.:||:|:.:.:|.|..|..:.|:||:..||..:|::|:|
  Rat    66 EVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIG 130

  Fly   139 CKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVNEVF 203
            ||.|||   :|:..|..       :|||....:.......|..:..|..|.|.|......|.:||
  Rat   131 CKTDLR---KDKEQLRK-------LRAAQLEPITYTQGLSACEQMRGALYLECSAKFRENVEDVF 185

  Fly   204 ENAIRSALIARRQQRFWMTNLKKVQK 229
            ..|.:.||.|          |||.|:
  Rat   186 REATKVALSA----------LKKAQR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 58/200 (29%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
RhofNP_001385887.1 Rho4_like 17..211 CDD:206704 65/221 (29%)
Blue background indicates that the domain is not in the aligned region.

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