DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rac3

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_063125945.1 Gene:Rac3 / 688319 RGDID:1590052 Length:250 Species:Rattus norvegicus


Alignment Length:179 Identity:67/179 - (37%)
Similarity:96/179 - (53%) Gaps:35/179 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|.  .:|:      |||..
  Rat     2 QAIKCVVVGDGAVGKTCLLISYTTN------AFPGEYIPTVF--DNYS--ANVM------VDGKP 50

  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139
            |:|.||||.|  |:|:.|..:|.::||.|:|||:.||.|..|.:..||||:|..||..|::|||.
  Rat    51 VNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGT 115

  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMP---DEARAVAKELG 185
            |.|||            .:|.|..|  |:...:.|   .:..|:|:|:|
  Rat   116 KLDLR------------DDKDTIER--LRDKKLAPITYPQGLAMAREIG 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 67/179 (37%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rac3XP_063125945.1 None
Blue background indicates that the domain is not in the aligned region.

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