DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoBTB and rhobtb3

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_691270.6 Gene:rhobtb3 / 562804 ZFINID:ZDB-GENE-091204-190 Length:619 Species:Danio rerio


Alignment Length:647 Identity:166/647 - (25%)
Similarity:256/647 - (39%) Gaps:128/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QYRIYKD--VLER---SWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSDVVLLCFSIASPISLRN 116
            |.|:..|  |:.|   ||:::|...||:             |....::|:|::.:|:...::.:.
Zfish    64 QSRVMGDVRVMVRDCPSWDILDSDWVSV-------------RSILEQADIVVIKYSVNDKLAFQQ 115

  Fly   117 CKMMWYPEIRRFCP--DVPVILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALK-SDLVMPDEAR 178
            .:..:.|.:|....  .||||||.....|    .||      |...|....|.. |..|...|..
Zfish   116 VRNGYAPRLRPLLRHWGVPVILVAVGARL----NDE------GPPCTCPLCASDWSSCVPHSEGL 170

  Fly   179 AVAKELGVAYYETSVFTYFGVNEVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFR--PPKP 241
            .::::||..|.|......|.|...|.:.:...:|...:|       |..::|..:...|  .|:|
Zfish   171 QLSRDLGATYLELPSLNNFFVGRYFGSVLEYFMIQCLKQ-------KAKERPDKRRGHRLNEPRP 228

  Fly   242 PP-------PEVTVMVGNYRQDIYNMFLSQA--YTDLVL-VGAGGTKFA-VHRFMLAAASSIFQR 295
            |.       |.|.|...::.||: ...|.:.  :.|:.. .|..|.:.. .|..:|.|.|..|::
Zfish   229 PHLDQPARLPPVRVEESSFSQDL-QWLLERGVQFADVAFYAGESGKELGWAHASVLCAVSPYFRQ 292

  Fly   296 LLSTELTDMGGRSSSESSMVSSTFGEATIADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLM 360
            ||.       ||.:.|..:     ...|..| .|...:|:       ..|:              
Zfish   293 LLV-------GRQAWERPV-----SRCTCRD-RDGPHSLL-------STWD-------------- 323

  Fly   361 ESKRSNDLYRELHHPVLQSIRLVHVENHRGVNGLQTIVTLSKLISPQALHQCLRFIYTGTIDKDC 425
              ...:||.|...||          ..|     |..:|....|:. ..|.:.|.|:|.|..:   
Zfish   324 --GGVDDLPRADGHP----------PGH-----LSRLVVKDPLLC-LCLWETLMFLYRGAWE--- 367

  Fly   426 DNIEEIREA-ADLLELPQ-LTQLLSRPQTVMENSS---DEPNPHICLRIKESMERHCIG----DG 481
              .|.:.|| |:.|:.|. :.||:.|.::.:....   |.|.|      :.......:|    ..
Zfish   368 --WEYLEEAIAEKLKNPMAVAQLMDRMRSFVGREKAPRDTPTP------RSQQGPMTLGSLFNSP 424

  Fly   482 CFSDVTFELDDGLMKAHRAVLVGRCDVMRAMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQ 546
            .:|||.|.:...::.|||||||.|||||.||..|.:.||.|.|:...||:..||...|.|||||.
Zfish   425 LYSDVIFMVQGSVLPAHRAVLVARCDVMAAMFSGKYAEARSRVVPIHGVSSDTFLAFLEYLYTDT 489

  Fly   547 IPPISAVKCLNLLELANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKLLEPVKLHNAHQ 611
            ..|.|.::.:.:|..|....:.||.:|.|..|...|..:...|...|....::||...|.|||.|
Zfish   490 CCPASVLQAMAILVCAEMYQVKRLQHLCEVCVCAYLQSMPSRELASTGISVIRLLRRAKCHNADQ 554

  Fly   612 LAEWCMSYLCVNYNLICKFSLK-GLKALHQDNQEYLREHRWPPVWYLKDYDYYQRCLNELNK 672
            |..|.:.::..||.:   ||.| ....|..:.:|.:...|||...||::...||:...::.|
Zfish   555 LYVWLLHFIANNYLI---FSHKPDFLELSDEEREQVERLRWPSRGYLQELSEYQQRRRQIRK 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 38/160 (24%)
RHO 16..211 CDD:197554 38/161 (24%)
BTB <392..446 CDD:295341 14/55 (25%)
BTB 481..575 CDD:279045 40/93 (43%)
BTB 485..582 CDD:197585 41/96 (43%)
rhobtb3XP_691270.6 P-loop_NTPase <97..189 CDD:304359 24/101 (24%)
BTB 254..>296 CDD:295341 11/48 (23%)
BTB 417..518 CDD:279045 41/100 (41%)
BTB 428..518 CDD:197585 39/89 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.