DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and rhoh

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001314902.2 Gene:rhoh / 553413 ZFINID:ZDB-GENE-060228-7 Length:195 Species:Danio rerio


Alignment Length:222 Identity:82/222 - (36%)
Similarity:113/222 - (50%) Gaps:52/222 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYR--IYK----DVLERSWEVV 72
            ||||||||.|||||.|           |.:..|...|     |.||  :|:    ||.      :
Zfish     9 VKCVLVGDCAVGKTAL-----------LVRFTSETFP-----DSYRPTVYENTGVDVF------M 51

  Fly    73 DGVNVSLRLWDTFGDHDKDRR---FAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPV 134
            ||:.:||.||||.| ||..|:   .:|..:||||||:|:|:|.||.|.:..|..|:|.:.|.|||
Zfish    52 DGIQISLGLWDTAG-HDTFRQIRPMSYQDADVVLLCYSVANPSSLNNLRHKWIAEVREYLPKVPV 115

  Fly   135 ILVGCKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFG 198
            ::|..:.|.|             |.|.:     :::.....|.:.||:|: ...|.|.|..:..|
Zfish   116 LVVATQTDHR-------------EMGPY-----RANCTTSPEGKQVAQEIRAKGYLECSALSNRG 162

  Fly   199 VNEVFENAIRSAL-IARRQQRFWMTNL 224
            |.:|||.|:|:|: .||||.|..:.||
Zfish   163 VQQVFECAVRTAVNRARRQTRRRLLNL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 74/205 (36%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
rhohNP_001314902.2 None
Blue background indicates that the domain is not in the aligned region.

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