DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoBTB and rhoua

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001007444.1 Gene:rhoua / 492802 ZFINID:ZDB-GENE-040618-3 Length:254 Species:Danio rerio


Alignment Length:222 Identity:83/222 - (37%)
Similarity:114/222 - (51%) Gaps:33/222 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVS 78
            ||||||||.|||||.||.:...|.:.      :.:|||  |.|.:        .:...|||..|.
Zfish    47 VKCVLVGDGAVGKTSLIVSYTTNGYP------TEYVPT--AFDNF--------AAVVAVDGKPVK 95

  Fly    79 LRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKN 141
            |:|.||.|  :.||.|...|..:||.|||||:.||.|.:|.:..|.|||||.||..|::|||.::
Zfish    96 LQLCDTAGQDEFDKLRPLCYTNADVFLLCFSVVSPSSFQNVREKWVPEIRRHCPRAPILLVGTQS 160

  Fly   142 DLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEVFEN 205
            |||   .|...|...        |..|...|.|.:|...|:|: .|:|.|.|..|...:.|||:.
Zfish   161 DLR---EDVKVLIQL--------AQYKERPVEPQDASVCAEEVQAVSYMECSALTQKNLKEVFDT 214

  Fly   206 AIRSAL---IARRQQRFWMTNLKKVQK 229
            ||.:::   .:::|:|.......|::|
Zfish   215 AIVASIQYSDSQQQKRLKKRTPDKMRK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 79/198 (40%)
RHO 16..211 CDD:197554 77/197 (39%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
rhouaNP_001007444.1 Wrch_1 47..219 CDD:133330 79/198 (40%)
RHO 49..221 CDD:197554 77/198 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.