DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rho1

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster


Alignment Length:207 Identity:82/207 - (39%)
Similarity:113/207 - (54%) Gaps:30/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSL 79
            |.|:|||.|.|||.|:..      .|..|....:||||     :..|...:|     |||..|.|
  Fly     7 KLVIVGDGACGKTCLLIV------FSKDQFPEVYVPTV-----FENYVADIE-----VDGKQVEL 55

  Fly    80 RLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKND 142
            .||||.|  |:|:.|..:|..:||:|:|||:.||.||.|....|.||::.|||:||:||||.|.|
  Fly    56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120

  Fly   143 LRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYETSVFTYFGVNEVFENA 206
            ||   .|.|.:...        |.:|.:.|.|.|.||:|:::.. ||.|.|..:..||.:|||.|
  Fly   121 LR---NDPNTIRDL--------AKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETA 174

  Fly   207 IRSALIARRQQR 218
            .|:||..:::::
  Fly   175 TRAALQVKKRKK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 80/197 (41%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 80/198 (40%)
Blue background indicates that the domain is not in the aligned region.

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