DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and rhogb

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_956334.1 Gene:rhogb / 336933 ZFINID:ZDB-GENE-030131-8877 Length:191 Species:Danio rerio


Alignment Length:201 Identity:71/201 - (35%)
Similarity:111/201 - (55%) Gaps:30/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVS 78
            :|||:|||.|||||.|:.:      .:.......::|||:  |.|        .|...||...||
Zfish     4 IKCVVVGDGAVGKTCLLIS------YTTGAFPKEYIPTVF--DNY--------SSQVSVDNRTVS 52

  Fly    79 LRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKN 141
            |.||||.|  ::|:.|..:|.:::|.::||||:||.|..|.|..|:||:...||.||::|||.|:
Zfish    53 LNLWDTAGQEEYDRLRTLSYPQTNVFIICFSISSPPSYENIKHKWHPEVTHHCPSVPILLVGTKS 117

  Fly   142 DLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEVFEN 205
            |||   .|.:.|....|:.   :|.:.:     .:.:|:|::: .|.|.|.|..:..|:.:||.:
Zfish   118 DLR---NDADVLKKLKEQN---QAPITT-----QQGQALARQIHAVKYRECSALSQDGIKDVFAD 171

  Fly   206 AIRSAL 211
            |:|:.|
Zfish   172 AVRAYL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 70/198 (35%)
RHO 16..211 CDD:197554 69/197 (35%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
rhogbNP_956334.1 P-loop_NTPase 1..191 CDD:304359 71/201 (35%)
RHO 6..179 CDD:197554 70/199 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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