DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and cdc42

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_956926.1 Gene:cdc42 / 336839 ZFINID:ZDB-GENE-030131-8783 Length:191 Species:Danio rerio


Alignment Length:243 Identity:78/243 - (32%)
Similarity:112/243 - (46%) Gaps:57/243 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||:|||.|||||.|:.:...||      ..|.:||||:  |.|.:        ..::.|..
Zfish     2 QTIKCVVVGDGAVGKTCLLISYTTNK------FPSEYVPTVF--DNYAV--------TVMIGGEP 50

  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139
            .:|.|:||.|  |:|:.|..:|.::||.|:|||:.||.|..|.|..|.|||...||..|.:|||.
Zfish    51 YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115

  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAAL-KSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEV 202
            :.|||            .:..|..:.|. |...:.|:.|..:|::| .|.|.|.|..|..|:..|
Zfish   116 QIDLR------------DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168

  Fly   203 FENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVMV 250
            |:.||.:||                         .||:|......|::
Zfish   169 FDEAILAAL-------------------------EPPEPKKKRKCVLL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 72/201 (36%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
cdc42NP_956926.1 Cdc42 3..177 CDD:206664 72/201 (36%)
Blue background indicates that the domain is not in the aligned region.

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