DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and rhoq

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_956112.1 Gene:rhoq / 327510 ZFINID:ZDB-GENE-030131-5721 Length:205 Species:Danio rerio


Alignment Length:206 Identity:65/206 - (31%)
Similarity:108/206 - (52%) Gaps:30/206 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNV 77
            ::|||:|||.|||||.|:.:.|.:      .....:||||:  |.|.:.        ..|.|...
Zfish     9 MLKCVVVGDGAVGKTCLLMSYAND------AFPEEYVPTVF--DHYAVS--------VTVGGKQY 57

  Fly    78 SLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCK 140
            .|.|:||.|  |:|:.|..:|..:||.|:|||:.:|.|.:|.:..|.||::.:.|::|.:|:|.:
Zfish    58 LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVREEWVPELQEYAPNIPYLLIGTQ 122

  Fly   141 NDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGV-AYYETSVFTYFGVNEVFE 204
            .|||   .|...::...:        :|...::.::.:.:|||:|. .|.|.|..|..|:..||:
Zfish   123 IDLR---DDPKTIAKLND--------VKEKPIVTEQGQKLAKEIGACCYVECSALTQKGLKTVFD 176

  Fly   205 NAIRSALIARR 215
            .||.:.|..::
Zfish   177 EAIIAILAPKK 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 64/199 (32%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
rhoqNP_956112.1 P-loop containing Nucleoside Triphosphate Hydrolases 10..183 CDD:476819 64/199 (32%)
Blue background indicates that the domain is not in the aligned region.

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