DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and rhogc

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_955986.1 Gene:rhogc / 324681 ZFINID:ZDB-GENE-030131-3402 Length:191 Species:Danio rerio


Alignment Length:203 Identity:76/203 - (37%)
Similarity:106/203 - (52%) Gaps:30/203 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVN 76
            :.:|||:|||.|||||.|:.:...|      .....::|||:  |.|        .:...|||..
Zfish     2 QTIKCVVVGDGAVGKTCLLISYTTN------AFPDEYIPTVF--DNY--------STQTCVDGRA 50

  Fly    77 VSLRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGC 139
            |||.||||.|  ::|:.|..:|.::.|.::|||:|||.|..|.:..|:||:...||.|||:|||.
Zfish    51 VSLNLWDTAGQEEYDRLRTLSYPQTHVFIICFSVASPSSHANVRHKWHPEVCHHCPGVPVLLVGT 115

  Fly   140 KNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELG-VAYYETSVFTYFGVNEVF 203
            |.|||   .|:..|....|:|        .....|.:..|:|:.:| |.|.|.|.....||.|||
Zfish   116 KRDLR---GDKETLEKLKEQG--------MSPTTPQQGSALARSIGAVRYLECSALLQEGVREVF 169

  Fly   204 ENAIRSAL 211
            ..|:|:.|
Zfish   170 NEAVRAVL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 75/200 (38%)
RHO 16..211 CDD:197554 74/197 (38%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
rhogcNP_955986.1 RhoG 1..191 CDD:133277 76/203 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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