DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhog

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001032272.1 Gene:Rhog / 308875 RGDID:621310 Length:191 Species:Rattus norvegicus


Alignment Length:201 Identity:75/201 - (37%)
Similarity:107/201 - (53%) Gaps:30/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVS 78
            :|||:|||.|||||.|:.....|      .....::|||:  |.|        .:...|||..|:
  Rat     4 IKCVVVGDGAVGKTCLLICYTTN------AFPKEYIPTVF--DNY--------SAQSAVDGRTVN 52

  Fly    79 LRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVGCKN 141
            |.||||.|  ::|:.|..:|.:::|.::|||||||.|..|.:..|:||:...|||||::|||.|.
  Rat    53 LNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKK 117

  Fly   142 DLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEVFEN 205
            |||   ...:.|....|:|        ...:.|.:.:|:||:: .|.|.|.|.....||.|||..
  Rat   118 DLR---AQPDTLRRLKEQG--------QAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAE 171

  Fly   206 AIRSAL 211
            |:|:.|
  Rat   172 AVRAVL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 74/198 (37%)
RHO 16..211 CDD:197554 73/197 (37%)
BTB <392..446 CDD:295341
BTB 481..575 CDD:279045
BTB 485..582 CDD:197585
RhogNP_001032272.1 RhoG 1..191 CDD:133277 75/201 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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