DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhobtb2

DIOPT Version :9

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001013151.1 Gene:Rhobtb2 / 306004 RGDID:1309924 Length:728 Species:Rattus norvegicus


Alignment Length:808 Identity:300/808 - (37%)
Similarity:416/808 - (51%) Gaps:172/808 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MDNEQPHQELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERS 68
            ||.|:|:.|.:|||:|||.||||||||||||||..::..|||:|||||||||||||:.::|||||
  Rat     5 MDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERS 69

  Fly    69 WEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVP 133
            .:|||.|:||||||||||||.|||||||||||||:||||||:|.||.:.|.||||||:.|||..|
  Rat    70 RDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAP 134

  Fly   134 VILVGCKNDLRY-----MYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKELGVAYYETSV 193
            ||||||:.||||     :.|....|:         |....::::.|::.|.||||||:.||||||
  Rat   135 VILVGCQLDLRYADLEAVNRARRPLA---------RPIKPNEILPPEKGREVAKELGIPYYETSV 190

  Fly   194 FTYFGVNEVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTV---------- 248
            ...||:.:||:||||:|||:||..:||.::|:.||:|||||||.|||||||.:.|          
  Rat   191 VAQFGIKDVFDNAIRAALISRRHLQFWKSHLRNVQRPLLQAPFLPPKPPPPIIVVPDPPSSSEEC 255

  Fly   249 -------------------MVGNYRQDIYNMFLSQAYTDLVLV-----------GAGGTKFAVHR 283
                               .|..:...||....|..:.||.|:           |.||.:...||
  Rat   256 PAHLLEDPLCADVILVLQERVRIFAHKIYLSTSSSKFYDLFLMDLSEGELGGPSGPGGPRPEDHR 320

  Fly   284 -----------------FMLAAASSIFQRLLSTELTDMGGRSSSESSMVSSTFGEATIADFNDDT 331
                             |:|.|||  |.  :...:.:.||  |..:.:.:||            :
  Rat   321 SYPEQHYHHHHHHHGRDFLLRAAS--FD--VCESVDEAGG--SGPAGLRAST------------S 367

  Fly   332 EALIR-----Y---ESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIRLVHVENH 388
            :.::|     |   ..|....|.        :|...::.:.:.|       |:....||:     
  Rat   368 DGILRGNGTGYLPGRGRVLSSWS--------RAFVSIQEEMAED-------PLTFKSRLM----- 412

  Fly   389 RGVNGLQTIVTLSKLISPQALHQCLRFIYTGTIDKDCDNIEEIREAADLLELPQLTQLLSRPQTV 453
                   .:|.:...|.|......|:::|||.:.::..::..|...|:|||:..|..:::.    
  Rat   413 -------VVVKMDNSIQPGPFRAVLKYLYTGELGENERDLMHIAHIAELLEVFDLRMMVAN---- 466

  Fly   454 MENSSDEPNPHICL--------RIKESMERHCIGDGCFSDVTFELDDGLMKAHRAVLVGRCDVMR 510
            :.|:....|..|..        |:||     |:..|.||||||.||||.:.||:.:|:..||.|.
  Rat   467 ILNNEAFMNQEITKAFHVRRTNRVKE-----CLAKGTFSDVTFILDDGTISAHKPLLISSCDWMA 526

  Fly   511 AMLLGDFREAHSNVIVFPGVTIYTFHKLLCYLYTDQIPPISAVKCLNLLELANRLCLPRLLNLVE 575
            ||..|.|.|:.:..:|||..:......:|.||||........:..:.|:.||||||||.|:.|.|
  Rat   527 AMFGGPFVESSTREVVFPYTSKSCMRAVLEYLYTGMFTSSPDLDDMKLIVLANRLCLPHLVALTE 591

  Fly   576 CRVIEDLTLISQNETNETVD---HCLKLLEPVKLHNAHQLAEWCMSYLCVNYNLICKFSLKGLKA 637
            ...:..|    ...|...||   ..|..||..:.|.|:|||:||:.::|.|||.:|:...:.:||
  Rat   592 QYTVTGL----MEATQMMVDIDGDVLVFLELAQFHCAYQLADWCLHHICTNYNNVCRKFPRDMKA 652

  Fly   638 LHQDNQEYLREHRWPPVWYLKDYDYYQRCLNELNKE----LKLKTSRRESPSDDEGCLCFTGVFS 698
            :..:||||..:||||||||||:.|:|||...|..||    |:.:..||                 
  Rat   653 MSPENQEYFEKHRWPPVWYLKEEDHYQRARKEREKEDYLHLRRQPKRR----------------- 700

  Fly   699 CWLL--GKSKRSADVSGTTDNSNADNQI 724
             ||.  ..|..|:..:|:...|::.:.:
  Rat   701 -WLFWNSPSSPSSSAAGSASPSSSSSAV 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 126/202 (62%)
RHO 16..211 CDD:197554 124/199 (62%)
BTB <392..446 CDD:295341 13/53 (25%)
BTB 481..575 CDD:279045 41/93 (44%)
BTB 485..582 CDD:197585 39/96 (41%)
Rhobtb2NP_001013151.1 RhoBTB 13..207 CDD:133275 126/202 (62%)
BTB_POZ 250..475 CDD:365784 46/273 (17%)
BTB2_POZ_RHOBTB2 480..603 CDD:349668 47/131 (36%)
BACK_RHOBTB2 608..704 CDD:350606 43/113 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 253 1.000 Domainoid score I1999
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22873
Inparanoid 1 1.050 508 1.000 Inparanoid score I1276
OMA 1 1.010 - - QHG49800
OrthoDB 1 1.010 - - D246417at33208
OrthoFinder 1 1.000 - - FOG0002876
OrthoInspector 1 1.000 - - otm45666
orthoMCL 1 0.900 - - OOG6_105764
Panther 1 1.100 - - LDO PTHR24072
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1903
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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