DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoBTB and Rhoh

DIOPT Version :10

Sequence 1:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001013448.1 Gene:Rhoh / 305341 RGDID:1307623 Length:191 Species:Rattus norvegicus


Alignment Length:212 Identity:65/212 - (30%)
Similarity:102/212 - (48%) Gaps:44/212 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVW---AIDQYRIYKDVLERSWEVVDGV 75
            :|||||||:|||||.|:.      ..:.......:.|||:   .:|.:             :||:
  Rat     5 IKCVLVGDSAVGKTSLLV------RFTSETFPEAYKPTVYENTGVDVF-------------MDGI 50

  Fly    76 NVSLRLWDTFGD--HDKDRRFAYGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFCPDVPVILVG 138
            .:||.||||.|:  ....|..:|.::||||:|:|:|:..|..|.|..|..|:|...|..||::|.
  Rat    51 QISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHSSFLNLKNKWISEVRSNLPCTPVLVVA 115

  Fly   139 CKNDLRYMYRDENYLSYFGEKGTFVRAALKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEV 202
            .:.|.|.|                  ...::..:...|.:.:|::: ...|.|.|..:..||.:|
  Rat   116 TQTDQREM------------------GPHRASCINAIEGKRLAQDVRAKGYLECSALSNRGVQQV 162

  Fly   203 FENAIRSAL-IARRQQR 218
            ||.|:|:|: .|||:.|
  Rat   163 FECAVRTAVNQARRRNR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 60/201 (30%)
BTB1_POZ_RhoBTB 255..452 CDD:349608
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
RhohNP_001013448.1 Rho 5..169 CDD:206641 59/200 (30%)
Blue background indicates that the domain is not in the aligned region.

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